Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5781 |
Symbol | |
ID | 4452263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2903556 |
End bp | 2904290 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639697842 |
Product | polysaccharide deacetylase |
Protein accession | YP_839407 |
Protein GI | 116693874 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.878477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTACGC GCACCCCACG CTATCCGATC CTGATGTATC ACCAGATCCG CCCGCTGCCG CCGCCGACCG ACCGGCTGCG CAGCCTGAGC GTCGCCCCCG ACGCGTTCCG CCGCCAGATG ACGCTGTTCC GGCAGCTCGG CTACCGCGGC CTGAGCGTGC GCGAACTGCA GCCGTACCTG CGCGGGGAGC GGCAGGGCAA GGTCTTCGGT ATTTCGTTCG ACGACGGCTT TCTCAACGTG CTGACGCATG CGATGCCCGT GCTGGATGCG CTCGGATTCA CCGCGACCTG CTACTTCGTC GCCGGCCGGT TCGGCGGCGC GAACGATTGG GACGCGGGCG CGCCGACCGC GCGCTCGCCG CTGATGACCT GCGAGGACAT GCTCGCGTGG CGCGATCACG GCCATGAAAT CGGCTCGCAT ACGCTCGATC ACGTCGCGCT GTCGTATGTG CCGGCGCCTG TTTCGGCGTT TCAGTTGACC GAATCGAAGC GGCAACTCGA AATGCTGAGC GGGCAATGCG TCGAATCGTT CTGTTATCCG TACGGCGATC TCGATGCACG CGTGCGCGAT CAGGTCATCG CTGCCGGTTA CGGCAACGCG ACGACGACCC GGCGCGGATG CGCCGGTGCG ACCGACGATC CGTTTCTGCT GCCGCGGATT CCGGTCGCGG GCGGGGTCGG GGCTGTGAGG CTGTGGTTCA AGTGCATGAA GGGGCGAATG GCGGGGTGCC GATAA
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Protein sequence | MLTRTPRYPI LMYHQIRPLP PPTDRLRSLS VAPDAFRRQM TLFRQLGYRG LSVRELQPYL RGERQGKVFG ISFDDGFLNV LTHAMPVLDA LGFTATCYFV AGRFGGANDW DAGAPTARSP LMTCEDMLAW RDHGHEIGSH TLDHVALSYV PAPVSAFQLT ESKRQLEMLS GQCVESFCYP YGDLDARVRD QVIAAGYGNA TTTRRGCAGA TDDPFLLPRI PVAGGVGAVR LWFKCMKGRM AGCR
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