| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5773 |
|---|
| Symbol | |
|---|
| ID | 4452014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2893802 |
|---|
| End bp | 2894581 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639697834 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_839399 |
|---|
| Protein GI | 116693866 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.669739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGC CGATGCCCAA CACTTCTTCC CGTCGCACCA GAACACCGTC GCCGGCCGTC
TCGAACGGGC AAGCGCCGTC GAGCCCCGAG GTTCGCGAGC CGCGGGGCGC GCGCCGCAAG
CGCGAGACGC GCGCGCGATT GCTGGATGCC GCCTTTGTAC TCATGGCGCA AAAGGGGATG
GAAGGCGTCG CGATCAATGA AATTACGGAA GCCGCGGACG TGGGTTTCGG GTCGTTCTAC
AACCACTTCG AATCGAAAGA GGCGATTCAT GCCGCGGTTC TGGAAATCGT GTTCGAGGAG
TTCGCGGATA CCCTGGACCG CATCGCAGGC AGCCTCACCG ACCCGGCCGA GATCATTTCC
GTGTCGCTGC GCCATACATT GCTGCGAGCC AGAAGCGAGC CGGTCTGGGG ACAATTTCTC
CTGCGCGAAG GGTTGTCCAT GCGAGCGCTC AGCCGCGGCC TCGGACCGCG GTTGTTGAGG
GATATTCAGA AAGGCATCGT CGCCGGGAGA TTCTCGGCAA GCGACCCGCT GATGAGCGTG
ATTACGGTCG GGGGCGCGGT ACTGACCGCC ATTGCGATCG AGCTCCGATT CGATGCGGAC
GAGAAGCCGG TTACCGACAT GTTGAACATG ATCGGGTACA GTCAGAACGG CTTTGCCGAG
CGTGCAGCTT CATCCCTGTT GCAGACGCTG GGTGTGCCGC GAACTGAAGC GACAGAGATT
GCGAATCGCC CGTTGCCGCC GGCTGTGACG TCTGCGCCCG AGGAGTCGCC GGAGCGCTAG
|
|---|
| Protein sequence | MRTPMPNTSS RRTRTPSPAV SNGQAPSSPE VREPRGARRK RETRARLLDA AFVLMAQKGM
EGVAINEITE AADVGFGSFY NHFESKEAIH AAVLEIVFEE FADTLDRIAG SLTDPAEIIS
VSLRHTLLRA RSEPVWGQFL LREGLSMRAL SRGLGPRLLR DIQKGIVAGR FSASDPLMSV
ITVGGAVLTA IAIELRFDAD EKPVTDMLNM IGYSQNGFAE RAASSLLQTL GVPRTEATEI
ANRPLPPAVT SAPEESPER
|
|---|
| |