| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5750 |
|---|
| Symbol | |
|---|
| ID | 4451230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2873918 |
|---|
| End bp | 2874307 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639697811 |
|---|
| Product | 4-carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_839376 |
|---|
| Protein GI | 116693843 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0988817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACC AGGAACGTTA TGAAGCAGGG ATGAAGGTGC GTCGCGCGGT GCTCGGCGAC
GCGCACGTCG ACCGTTCGAT CGAGAACCGC ACCGAGGTGA CCGACGAATT CCAGAATCTG
ATCACGCGCT ATGCATGGGG CGAGATCTGG ACCCGCGACG GACTGCCGCG CCATACGCGC
AGCCTGCTGA CCATCGCGAT GATGGTGGCG CTGAACCGCG GCGAGGAACT GGCGCTGCAC
CTGCGCGCCG CGCGCAACAA CGGCGTGACG CGCGACGAGA TCAAGGAAGT GCTGCTGCAG
ACCGCGATCT ATTGCGGCGT GCCGGCCGCG AATTCCGCGT TCCATCTCGC GGACAAGATC
TTCAAGGAAC AGGATGGTGC TGCTGGTTAA
|
|---|
| Protein sequence | MDDQERYEAG MKVRRAVLGD AHVDRSIENR TEVTDEFQNL ITRYAWGEIW TRDGLPRHTR
SLLTIAMMVA LNRGEELALH LRAARNNGVT RDEIKEVLLQ TAIYCGVPAA NSAFHLADKI
FKEQDGAAG
|
|---|
| |