Gene Bcen2424_5735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5735 
Symbol 
ID4452583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2860650 
End bp2861270 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID639697796 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_839361 
Protein GI116693828 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.289905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC TCGCTTTTTC CCACGGCGCC GCACTGTGCG CGTCGCTCAT CGTCACCATC 
GGCGCACAGA ACGCATTCGT GCTGCGCCAG GGCATCATGC GCTCGCACGT CGGCAAGATC
GTGCTGCTGT GCGCGGTGTC CGACATGATC CTGATCGGCG CGGGCGTCGG CGGCGCATCG
GTGCTGGTCG AGCGCTATCC GACCTTCGTC CATGCGGTGC TGTACGTGGG CCTCGCGTAT
CTCGCGTGGT TCGGCATCAA CGCGCTGCGC CGTGCGTTCA AGCCGGGCCA CGACACGCTC
GACGTGCGCG GCGACGCGGT CGCCCCGCCG CCGCAAGGCG CCCTCGCGAT CGTGCTGATG
ACGCTCGCAT TCACGTGGCT CAACCCGCAC GTCTACCTCG ACACGTTCCT GCTGATCGGC
ACGGCCGGCG CGCGCGAGCC GGAAGGCGCG CGGCTCGCGT TCGCGATCGG CGCGATGACG
GTCAGCGTCG TGTGGTTCCT CGGGCTCGGC TATGGCGCGC GATTGCTGGC GCCGTGGTTC
CGCAAGGCGG TCGCGTGGCG CGTGCTGGAC GGCGCGATCG GCAGCATGGT GCTGTTTCTC
GCGGCCGTGC AGTTGCGGTA G
 
Protein sequence
MNWLAFSHGA ALCASLIVTI GAQNAFVLRQ GIMRSHVGKI VLLCAVSDMI LIGAGVGGAS 
VLVERYPTFV HAVLYVGLAY LAWFGINALR RAFKPGHDTL DVRGDAVAPP PQGALAIVLM
TLAFTWLNPH VYLDTFLLIG TAGAREPEGA RLAFAIGAMT VSVVWFLGLG YGARLLAPWF
RKAVAWRVLD GAIGSMVLFL AAVQLR