Gene Bcen2424_5727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5727 
Symbol 
ID4452486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2850116 
End bp2851420 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content70% 
IMG OID639697788 
Productmajor facilitator transporter 
Protein accessionYP_839353 
Protein GI116693820 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC CCTCCTCCTC CAGGCGCGCC TGGACCTACG AGAACAGGCT GCTGCTGATC 
CTGTTCATGA CGTTCGGCTT CGTGTTCTTC GACCGCCTCG CGCTGTCGTT CCTGTTTCCG
TTCATGTCGG CCGAGCTGCA CCTGGCGAAC ACGCAGCTCG GCATGGTGTC GTCCGCGCTC
GCGCTCACGT GGGCGCTGTC AGGCGCCGCG ACCGGCGCAT GGTCCGACGC GCGCGGCACC
CGCAAGCCGC TGCTGGTCGC GGCCGTGCTC GGCTTTTCCG TGTGCTCGGC GCTGTCGGGG
CTCGTCGGCG GCTTCGCGAG CCTGATCGCG TTTCGCGCGC TGATTGGCAT CGCCGAAGGC
CCCGTGCTGC CGCTGTCGCA ATCGCTGATG GTCGAGAGTT CGACGCCGAG CCGCCGCGGG
CTGAACATGG GCCTGCTGCA AGGCTCGGCC GCCGGCCTGC TCGGCGCGAT GATCGGCCCG
CCGGTCGTGA TCGGCATCGC CACCGCATAC GGCTGGCGCG AGGCGTTCTA CGTGTCGTGC
ATTCCGGGCT TCCTGATCGC GTTCTGCATC TGGCGCTGGG TGCGCGAAGT GCCGCCCGGC
GGCGTGCGCC ACGTGCACGC CGATACCGCC GCGGTACCGG CCGCAAGCGG CGCCGAGTTC
AGCCGCTGGG CATTGCTGAA GGAGCGCAAC ATCCTGCTCT GCGTGCTGAT CAGCTGCTTC
TTTCTCACGT GGTTCGTCGT GATCATCTCG TTCGCGCCGG TGTTCCTCGT GGAAAGCCGT
CACCTGGCGC CGTCCGACAT GGGCGTCGTG ATGACCTGCC TCGGCGCCGC GTGGGTGTTC
TGGGGCTTCG CCGTGCCGGC GATCTCCGAC CGGATCGGTC GCAAGCCGAC GATGATCGGG
TTCGCGCTGA TCGCGGCCAT GTGCCCGGTC GTGCTGATCC ACGTCGGCTC GGTCTGGGCG
CTCGGCGCGC TCGTGTTCGT CACGTATACG GGCCTCGGCT GCTTCACGCT GTTCATGGCG
ACGATCCCGG CCGAAACGGT GCCGCCGCGA GCGATCGCGA GCGCGCTCGG GCTGATCATG
GGCGCCGGCG AGCTGATCGG CGGCTTCGTC GCGCCGACCG TCGCCGGCTT CGCGGCGGAC
AGGTACGGCC TGCAGTTCGC GATGTGGACC TCGACTACCG GCGCGATCCT CGCATGCGTG
CTGTCGTTCG GCCTCGTCGA AACCGCGCCG GCCGTGCTGC GCAAGCGCGC GCCCGCAGGC
GCCGCGGCCG GCCGCCTCGA TACGCACAAT CTCGGAGGAC GCTGA
 
Protein sequence
MTPPSSSRRA WTYENRLLLI LFMTFGFVFF DRLALSFLFP FMSAELHLAN TQLGMVSSAL 
ALTWALSGAA TGAWSDARGT RKPLLVAAVL GFSVCSALSG LVGGFASLIA FRALIGIAEG
PVLPLSQSLM VESSTPSRRG LNMGLLQGSA AGLLGAMIGP PVVIGIATAY GWREAFYVSC
IPGFLIAFCI WRWVREVPPG GVRHVHADTA AVPAASGAEF SRWALLKERN ILLCVLISCF
FLTWFVVIIS FAPVFLVESR HLAPSDMGVV MTCLGAAWVF WGFAVPAISD RIGRKPTMIG
FALIAAMCPV VLIHVGSVWA LGALVFVTYT GLGCFTLFMA TIPAETVPPR AIASALGLIM
GAGELIGGFV APTVAGFAAD RYGLQFAMWT STTGAILACV LSFGLVETAP AVLRKRAPAG
AAAGRLDTHN LGGR