Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5725 |
Symbol | |
ID | 4452484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2848293 |
End bp | 2849015 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639697786 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_839351 |
Protein GI | 116693818 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTC AGTGGGCGTT TGACGGGCAG TCCGTCGTGG TGACGGGCGG CACATCGGGC ATCGGCGCGC GCACCGCGCT GCGGTTCGCG CAGGCCGGCG CATCGGTCGT CGCGCTCGGG CTCGACGCCA CCGGCCCGCA TGCGCCCGTG CATGCCGGTG TCCGATGCGT GGAACTCGAC GTGGCCGACG GCGCGGCGCT GACGCGCACG ATCGCCGCGC TGCCGCGGCT CGACGTGCTC GTCAACGGCG TGGGCATCAG CCGGCACGCG GATGAATACC GGATGGACCA GTTCGAGCAC GTGCTGAACG TGAACCTGAC GTCGGTGATG CGGGCATCCG ACGCCGCGCG GCCCGCGCTG GCGGCCAACG GCGGCAGCAT CGTCAATATC GCGTCGATGT ACACGTACTT CGGCAGCAAG GACCGGCCCG CGTACAGCGC GAGCAAGGGC GGTATCGCAC AGCTCACGCG TTCGCTCGCG CAAGCGTGGG CCGATCACGG CATCCGCGTG AACGCGGTCG CGCCGGGCTG GATCGACACG CCGCTCAGCA GCGCTCTGAT GGCCGCCCCA CTGGCATCGC GCCGCATTCT TGAGCGCACG CCGCTCGGGC GCTGGGGCAC GGCCGACGAA GTCGCGGAAG TGATCCTGTT CCTGTGCTCG CCCGGCGCGT CGTTCGTCAC CGGCGCGGTC GTGCCGGTGG ACGGCGGATA TTCGACGGTC TAG
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Protein sequence | MSRQWAFDGQ SVVVTGGTSG IGARTALRFA QAGASVVALG LDATGPHAPV HAGVRCVELD VADGAALTRT IAALPRLDVL VNGVGISRHA DEYRMDQFEH VLNVNLTSVM RASDAARPAL AANGGSIVNI ASMYTYFGSK DRPAYSASKG GIAQLTRSLA QAWADHGIRV NAVAPGWIDT PLSSALMAAP LASRRILERT PLGRWGTADE VAEVILFLCS PGASFVTGAV VPVDGGYSTV
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