Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5724 |
Symbol | |
ID | 4452483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2847019 |
End bp | 2848110 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639697785 |
Product | outer membrane protein (porin) |
Protein accession | YP_839350 |
Protein GI | 116693817 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAA AGACCTTTCT GGCGCTCGCG GCCTGCACGT TTCCGGCCGC GGCGTTCGCG CAGAGCAGCG TGACGATGTT CGGGCTGATG GATACCGGCA TCAGCTACGT CAGCAATCAA GGCGGCCACG GCGCCGCGAA ATTCGACGAC AACATCTTCT TTCCGAACCT GCTCGGCTTC GAGGGCAAGG AGGATCTCGG CGCGGGCACG CGTGCGATCT TCCGGCTCGT CAACCAGTAT TCGCTCGGCA ACGGCGCGAT CATCGGCGGC GGGCTGTTCG CGCGCACCGC CTATGTCGGG TTGCAGAACG ACCGGTACGG CACGCTGACG CTCGGCAACC AGTACGAATT CATGGTCGAT GCGCTGGCCG CCAGCGGCAA CGAGATCGCG CAGGATCTCG TCGGCCTGTA CGGCTTTCGC AACGGGCCGT TCGATCGGCT CGCGCTGCCG AACAACCCGA CCGGTGCGTT CGACTGGGAC CGCGTCGCGG GCAGCAATCG CGTCGCGAAT TCGGTCAAGT ACACGAGCCC GTCGCTGTCG GGCCTGACCT TCGGCGCGCT ATACGGTTTC GGCAACGTCG CGGGGTCGAT CGGCGCGAAC AACACGGTCA GCGTCGGCGC CAGCTACGAC CACGGCCCGT TCGGCGCGGG CGCCGCCTAT ACGAACCAGA AATACGGCGC GGCCGACGGA CTGCCGCCCA CCAGCGTACG CAACTGGGGC GCGGGCGTGC ACTACACGGT CGGTACGGTC ACGGGCAAGG CGCTCTTCAC GACCGTGCAC AATGCGCGCA ACGGCGCGGG CGCGTGGTCG GCGGAAGCCG GTGCCGCCTG GCGGCCGTCG CCGGTATGGG TGATCGGCGC GAGCTACACG TACATGAAAG GCAACGACAC GCTCGACGAC ACGCACGCGC ATCAGTTTCT CGCCGCCATC CAGTACTGGC TGTCGAAGCG CACGATGGTG TACGTGGCCG GTGTGCATCA ACGTGCGAGC CACGGCGGCA ACGCGCAGAT CAACGGCGTG ATGGACGCGA ACGGCGCATC GAGCGGCGCG TTGCAGTCGA TCGCGCGGGT GGGGTTCAGT ACGCGGTTCT GA
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Protein sequence | MTKKTFLALA ACTFPAAAFA QSSVTMFGLM DTGISYVSNQ GGHGAAKFDD NIFFPNLLGF EGKEDLGAGT RAIFRLVNQY SLGNGAIIGG GLFARTAYVG LQNDRYGTLT LGNQYEFMVD ALAASGNEIA QDLVGLYGFR NGPFDRLALP NNPTGAFDWD RVAGSNRVAN SVKYTSPSLS GLTFGALYGF GNVAGSIGAN NTVSVGASYD HGPFGAGAAY TNQKYGAADG LPPTSVRNWG AGVHYTVGTV TGKALFTTVH NARNGAGAWS AEAGAAWRPS PVWVIGASYT YMKGNDTLDD THAHQFLAAI QYWLSKRTMV YVAGVHQRAS HGGNAQINGV MDANGASSGA LQSIARVGFS TRF
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