| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5690 |
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| Symbol | |
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| ID | 4452361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2811965 |
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| End bp | 2812618 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639697751 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_839316 |
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| Protein GI | 116693783 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000954295 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000200848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTCCGC TCCGTGACGC ACGCGCGATC GCTTCGAGAC ACCGCCATTC ACTCATGCTG
TCCGCACACG ACGACCCCGC CTATCTCGCG CAACTGCGGC ACGACCTGCT GCGCTTCGCT
CGACTCCAGC TCCGCGATGC CGACGCAGCC GAAGACGCCG TGCAGGAAGC GCTGGCTGCC
GCGTGGTCGC ATGCCGGCGA GTTCGCCGGG CTGTCGGCCC ACAAAACCTG GGTGTTCGGC
ATCCTGCGCA ACAAGCTGAT CGACGTGCTG CGCGCACGGC AGCGGATGGT GAGCCTGACC
GCGCTCGATG CCGAGCTCGA CGGCGAATCG ATCCTCGATC GCGAATTGTT CAAGGACAAT
GGACACTGGG CCGCGCATGC GAAACCGCGA CCGTGGCCGA AGCCCGACAC GCTGTTGCAG
CAACAGCAGT TCTGGACGCT GTTCCAGGTC TGCCTCGACC ATCTGCCGGA GCAGATCGGA
CGCGTGTTCA TGATGCGCGA ATTCCTCGAT GTCGAGATCG CGGACATCTG CAACGAATTG
ACGTTGACGA CGAATCATTG CAGCGTGCTG CTGTACCGGG CGCGCACGCG CCTGCGAACC
TGCCTGAGCG AAAAAGGACT GACGACCGAA GATGCTGCCG GGGAAATGTA CTGA
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| Protein sequence | MRPLRDARAI ASRHRHSLML SAHDDPAYLA QLRHDLLRFA RLQLRDADAA EDAVQEALAA
AWSHAGEFAG LSAHKTWVFG ILRNKLIDVL RARQRMVSLT ALDAELDGES ILDRELFKDN
GHWAAHAKPR PWPKPDTLLQ QQQFWTLFQV CLDHLPEQIG RVFMMREFLD VEIADICNEL
TLTTNHCSVL LYRARTRLRT CLSEKGLTTE DAAGEMY
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