| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5684 |
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| Symbol | |
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| ID | 4452355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2806377 |
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| End bp | 2807318 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639697745 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_839310 |
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| Protein GI | 116693777 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.656373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00195148 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGCCG CCGCCCCGTC GCTGAGCGAC CTCGTGATCG AGCGGGTCGG CTTCGGCCTG
TTCGTGCTCG ACCGTTCGAT GACCGTCCTG ATGTGGAATC GCTTCATGCA GGACCACAGC
GGCATCCCGG CCGCCGACGT GATCGGCCGC AACATCTTCG ACTGCTTTCC GGACCTGCCG
CGCGCGTGGC TGTCGCGCAA GCTCGAGAGC GTGTTCCAGC TGGGCAGCTT CGCGTTCAGC
TCGTGGGAGC AGCGGCCCTA TCTGTTCCGC TTCGAGCACG ACCGGCCGAT CACGGGCGGC
GTCGACTACA TGCAGCAGGA CTGCACGTTC ATGCCGCTCA CGCGCGGCCG CGACGTCGAG
GCCGTGTGCG TGACGATCTC GGACGTCACG CACGTGAGCG TGATGCAACG AGAGCGCGAG
GAAGCGGTCG CGAAGCTGCG CGAACACGCG AACCGCGACG GGCTGACCGG CATCGCGAAC
CGGCGCTTCT TCGAGGCGCG GCTCGGCGAC GAATTCGCGC GCTGGCAGCG CTACGGCGGC
GACCTGTCGG TGCTGCTGTT CGACCTCGAC CACTTCAAGA CGATCAACGA CCGCTTCGGG
CATGCGGCGG GCGACGCCGT GCTGCGCGAG ACCGCGCGCC GCGTCGCGTC GATCGTGCGC
GCGCAGGATA CGTTCGGGCG TTTCGGCGGC GAGGAATTCG CGCTGCTGCT GCCGTGCACG
AATCTCGACG AGGCGATGCG GGTGGCCGAC AAGGTGCGCG AGGCGATCGG CAGCATGCCG
GTCGATGCCG AGGGCGTCAG CGTGCCGGTC ACGGCGAGCG TCGGCGGCAC CTGCGCGAAA
GCCGGCGCGC TGACCTGCGA CGTACTCGTC AACGAGGCCG ACGCCGCGCT CTATCGTGCG
AAGCGGCTCG GGCGCGATCG GTCGGTCGCG TACGCTGACT GA
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| Protein sequence | MTAAAPSLSD LVIERVGFGL FVLDRSMTVL MWNRFMQDHS GIPAADVIGR NIFDCFPDLP
RAWLSRKLES VFQLGSFAFS SWEQRPYLFR FEHDRPITGG VDYMQQDCTF MPLTRGRDVE
AVCVTISDVT HVSVMQRERE EAVAKLREHA NRDGLTGIAN RRFFEARLGD EFARWQRYGG
DLSVLLFDLD HFKTINDRFG HAAGDAVLRE TARRVASIVR AQDTFGRFGG EEFALLLPCT
NLDEAMRVAD KVREAIGSMP VDAEGVSVPV TASVGGTCAK AGALTCDVLV NEADAALYRA
KRLGRDRSVA YAD
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