| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5681 |
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| Symbol | |
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| ID | 4452352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2803848 |
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| End bp | 2804882 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639697742 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_839307 |
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| Protein GI | 116693774 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.450879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0020025 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCGTG TCCGCCATCG AACTTCAAAG ATTGCTATAC TTTCGGCCAA TTCCGGCTTC
CGGCCGGTAA TTTGTGCCTG TCTGCGTCGA TCGTTCGCCT ATCCCGCACG CATTCGACGC
CCTGACCATC CCTGCCGGGC ATGGCTTCTT CAATCGCCCC GCGTGGGTGT CTCCGTGGAG
CTCGTCTTGG CCGTTTCCCA TTCCGTCGTG GACGAACAAG AAACCGACGC CGCTGCCGTC
ACATCGGGCA GTTCTTTCTA TCTGGCGATG CGCATCCTGC CGGCCGTGCA GCGCGATGCG
ATGTTCCAGG TCTACGCGTT TTGCCGCGCG GTCGACGACA TCGCCGACAG CGACCTGCCG
CGCGCCGAGC GCAACGCGGG CTTGAATCGC TGGCGCGCGG ACATCGACGC CTGCTTCGCC
GGTCGGCCGC CGCGCCACCT GGTCGCGCTC GATCGCGAGA TCCGCGCGTT CAACCTGCAG
CGCGACGATT TCCACGCGAT GATCGACGGA ATGGCGATGG ACGCGGCCGA AGATATCTGC
GCGCCCGACG AGCCGACGCT CGACCTCTTC TGCGATCGCG TGGCGAGCGC GGCCGGCCGG
CTATCGGTGA GGATCTTCGG GATGCCGGAA GCCGAAGGGA TCGCGCTGTC GCACCACCTG
GGCCGCGCGC TGCAACTGAC GAACATCCTG CGCGACATCG ACGACGACGC GGCGATCAAC
CGGTGCTACC TGCCGCGCGA GCTGCTCGCG CGCGAAGGCA TCGCGATCAC CGATCCGGCG
ACGATCGTGC GCGATCCGGC GCTGCCGCGC GTGTGCGCGA CGCTCGTCGA GCGCGCGCTC
GAGCACTTCT GCCAGGCCGA TGCGGTGATG GACACCTGCC CGCGTGCGCA GGTGAAGGCG
CCGCGCATCA TGTCGGGCGC GTATCGCTGC ATTCTCGAGG CCGCGATCGC ACGCGGCTTT
GCCGCGCCGC GCGCGCCGCT GCGCAAGCCG AAGGCGCGCA TGCTGATGAT CGCCGCGCGC
TACGCGCTGT TCTGA
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| Protein sequence | MARVRHRTSK IAILSANSGF RPVICACLRR SFAYPARIRR PDHPCRAWLL QSPRVGVSVE
LVLAVSHSVV DEQETDAAAV TSGSSFYLAM RILPAVQRDA MFQVYAFCRA VDDIADSDLP
RAERNAGLNR WRADIDACFA GRPPRHLVAL DREIRAFNLQ RDDFHAMIDG MAMDAAEDIC
APDEPTLDLF CDRVASAAGR LSVRIFGMPE AEGIALSHHL GRALQLTNIL RDIDDDAAIN
RCYLPRELLA REGIAITDPA TIVRDPALPR VCATLVERAL EHFCQADAVM DTCPRAQVKA
PRIMSGAYRC ILEAAIARGF AAPRAPLRKP KARMLMIAAR YALF
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