Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5670 |
Symbol | |
ID | 4452166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2788950 |
End bp | 2790515 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639697731 |
Product | diguanylate cyclase |
Protein accession | YP_839296 |
Protein GI | 116693763 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0236259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAA CCGACTACGC AATGCCCAGC GAATCCGGCC TGACGAGCCG TGTCGCCGCT CATCTGCGCC GGTTCCTCCT GCCGCACCTG ATCTTCTATA CGGGGCTGCT GATCGCGCTG ATCCTGCTGC TCCTGTGCGG GATCGTGCTG TACGAAGGCC GTATCGATGC GCGCGACCGC TCGCGCAGCA TGCAGCAGAA CCTCGCGCTG ATGGCGTCGT GGGACATCGA ACGCAACATC GAGATCTATT CGCTGTCGCT GCAGGCGGTG GTCGAAGGCG CGAACGACCC CGAAGTCACC AGGCTGCCGA TGCCGCTGCG CCGCCAGGTG CTGTTCGACC GTGCGACGAC GGCCAAGTAC CTCGGCGGCA TCTACGTGCT CGACGCGAAG GGCGACATCG CGGTCGACGG CAAGAGCGAC GTGCCGCGCA AGGCCAACTT CGGCAACGAG CCGTACTTCA CCGTGCACCG CGCCCGCCCC GACGTCGGCC TGTACGTCAG CGATCCGTAT CATTCCCGGC TGCGCGGGGG CTCGCCGAGC ATCGCGCTGA GCCGGCGGAT CACGCGGCCC GACGGGTCGT TCGGCGGCGT CGCGGTGATG TCGATCCGGC TCGAATATTT TCAGAACCTG TTCTCGCGCC TGTCGCTCGG CGATCGCGGT TCGGTTGCGC TGATCAACAC GGACGGCAAG ATGGTCGCGC GCGAGCCGTA CGACCCCAAG ATCGTCGGCC GCGACATCAG CCGCGCGAGC ACGTTCCGGC AATTCATGAC CGCCAGCGAA GGCAGCTTCG CCGATACCGC ATCGATCGAC GGCGTGCGGC GCCTGTACGT GTTCCGGCAC CTCGACGGCC TGCCGCTCAT CGTCATGGTC GCGCGCTCGG AAGCGGACAC CTACGCCGCG TGGTACGACC GTGCGATCCC GATCGGCTCC GCGATGGTCT TGCTCGCGAT CGGCTTCGTC GGCCTGTCGC TGCTGCTCGA CGTGCAGCTG CGCAAGCGCC ACCGCGCGGA AACCGAGCTG CAGGCGCTCG CGCGCACCGA CGGCCTGACG GGCCTCGACA ACCGCCGGAT GCTCGACGTC ACGCTCGCGC GCGAATGGCG CCGCGCCGCA CGTTCGCAAC ATGCGTTGTC GCTGCTGTTC ATCGACGTCG ATTACTTCAA GCACTACAAC GACACGCAGG GCCACCAGGC CGGCGACGAC GCACTCGCCG CGGTCGGCCA CTGCATCGCC GGATGCCTGC GCCGGCCGGC CGACTATGCG GCGCGCTACG GTGGCGAGGA ATTCGTCGTG GTGCTGCCGG ACATCGACAC GGACGGCGCG GTGACGATCG CCGAAACGAT CCGCACGGGC ATCCTCGATC TCGGCATCCG GCACGACGCC GGCACGGTCG GCCGGCTGAC GGTGAGCATC GGCGTGACGA CCAGCTATCC CGAGCGCGAC GACAACATCC AGGCCGCGCT GAAGCTGGCC GACGAGGCGT TGTACCGGGC GAAGGAAGGC GGGCGCAACC GCATCGTCGT ACAGGCAGCC ACGTCGCCGG ACGATCTCGA GTCGCGGCAG GCCTGA
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Protein sequence | MAETDYAMPS ESGLTSRVAA HLRRFLLPHL IFYTGLLIAL ILLLLCGIVL YEGRIDARDR SRSMQQNLAL MASWDIERNI EIYSLSLQAV VEGANDPEVT RLPMPLRRQV LFDRATTAKY LGGIYVLDAK GDIAVDGKSD VPRKANFGNE PYFTVHRARP DVGLYVSDPY HSRLRGGSPS IALSRRITRP DGSFGGVAVM SIRLEYFQNL FSRLSLGDRG SVALINTDGK MVAREPYDPK IVGRDISRAS TFRQFMTASE GSFADTASID GVRRLYVFRH LDGLPLIVMV ARSEADTYAA WYDRAIPIGS AMVLLAIGFV GLSLLLDVQL RKRHRAETEL QALARTDGLT GLDNRRMLDV TLAREWRRAA RSQHALSLLF IDVDYFKHYN DTQGHQAGDD ALAAVGHCIA GCLRRPADYA ARYGGEEFVV VLPDIDTDGA VTIAETIRTG ILDLGIRHDA GTVGRLTVSI GVTTSYPERD DNIQAALKLA DEALYRAKEG GRNRIVVQAA TSPDDLESRQ A
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