Gene Bcen2424_5656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5656 
Symbol 
ID4452137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2772652 
End bp2773809 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID639697717 
ProductABC transporter related 
Protein accessionYP_839282 
Protein GI116693749 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.115239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.353379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCA TCTCGATGCG ACGCGTGCAG AAAGCCTATG GCGAGCACGC GCCGGTCATT 
CGCGACGTCG ATCTGGAGAT CGGCGCGCAC GAGTTCTGCG TGTTTCTCGG GCCGTCCGGC
TGTGGGAAAT CAACGCTGCT GCGCATGATC GCCGGGCTCG AGGATCTGAG CGCGGGCGAG
CTGTCGATCG ACGGCCGCCG CGTCGACGAC GTGCCGGCCG CCGAGCGCGG CGTCGCGATG
GTGTTCCAGA GCTACGCGCT GTTTCCGCAC ATGACGGTGT ACGAGAACAT GGCGTTCGGG
CTGAAGCTCG CGCGCGTGCC GAAGGCCGAG ATCGACCGCA AGGTACGCGA CGCCGCGCGC
ATCCTGCAGC TCGACACGCT GCTCGAGCGC AAGCCGAAGG CGCTGTCCGG CGGCCAGCGG
CAGCGCGTCG CGATCGGCCG CGCGATCGTG CGCGAGCCCG GCGTATTCCT GTTCGACGAA
CCGCTGTCGA ATCTCGATGC GGCGCTGCGC GGCCAGACCC GCGTCGAAAT CGCGAAGCTG
CATCGGCAGT TCGAACGTGC GAGCGTCGTC TACGTGACGC ACGACCAGAC CGAGGCGATG
ACGCTCGCCG ACAAGATCGT GCTGCTGCAC GCCGGCGCGG ATACCGCGCG GCACGGCAGC
ATCGCTCAGG TCGGCGCGCC GCTCGACCTC TATCACCATC CGGCCAGCCG CTTCGTCGCG
GGCTTCATCG GCTCGCCGCG CATGAACTTC CTGCCGGCCG TCGTGACCGC GTGCGACGCG
CGTCGCACGA CCGTCACGCT CGTGCCGTCC GGCGAAACCT TCACGCTGCC GCGCGACGGC
TCGGCGCTCT CCGCCGGCGC CGCCGTGACG CTCGGCATCC GTCCCGAACA CCTGACGCTC
GGCGCCGCCC CCGATGCGAC GACGCTCGCG CGCGACGTCG CGCTCGTCGA ACGCCTCGGC
GAGCAGACCT ACGTGCACCT CGACTCGCCC GGCCTACCCG ACGCGACGCC GCTGATCGCG
AAAGTACCCG GCGACGCGCC GGTGCGCACC GGCGAACGCG TGCACGTGCA CGCGCCGGCC
GCGGCCTGCC ACCTGTTCAC CGAAGACGGC CGCGCGGTGC CCGCGTGCGC CGACCTTCCC
GTCCACCACT ACGCATAA
 
Protein sequence
MASISMRRVQ KAYGEHAPVI RDVDLEIGAH EFCVFLGPSG CGKSTLLRMI AGLEDLSAGE 
LSIDGRRVDD VPAAERGVAM VFQSYALFPH MTVYENMAFG LKLARVPKAE IDRKVRDAAR
ILQLDTLLER KPKALSGGQR QRVAIGRAIV REPGVFLFDE PLSNLDAALR GQTRVEIAKL
HRQFERASVV YVTHDQTEAM TLADKIVLLH AGADTARHGS IAQVGAPLDL YHHPASRFVA
GFIGSPRMNF LPAVVTACDA RRTTVTLVPS GETFTLPRDG SALSAGAAVT LGIRPEHLTL
GAAPDATTLA RDVALVERLG EQTYVHLDSP GLPDATPLIA KVPGDAPVRT GERVHVHAPA
AACHLFTEDG RAVPACADLP VHHYA