Gene Bcen2424_5642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5642 
Symbol 
ID4452002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2756287 
End bp2757216 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID639697703 
Productgalactose 1-dehydrogenase 
Protein accessionYP_839268 
Protein GI116693735 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00221401 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC CGATTTCGCT GGGTGTCGTC GGGATCGGCA AGATCGCGCG CGACCAGCAT 
CTGCCGGCGA TCGCCGCCGA GCCGGGCTTC GCGCTGACCG CCTGCGCGAG CCGCCATGCG
GAAGTCGCGG GGGTGCGCAA CTATCCCGAT CTGCGTGCGC TGCTGGCCGC CGAGCCCGAA
CTCGACGCGG TGTCGCTGTG CGCGCCGCCG CAGGTGCGCT ACGCACAGGC GCGCGCGGCG
CTCGAAGCCG GCAAGCACGT GATGCTCGAG AAGCCGCCGG GCGCGACGCT CGGCGAAGTG
GCCGCGCTGG ATGCGCTGGC CCGCGAGCGC GGCCTCACGC TGTTCGCGAC CTGGCATTCG
CGCTGCGCGA GCGCGGTCGA GCCGGCGCGT GTGTGGCTTG CGCAACGCAC GATCCGCGCG
GTGCAGGTGC GCTGGAAGGA AGACGTGCGG CGCTGGCATC CGGGGCAACA GTGGATCTGG
GAGCCGGGCG GCCTCGGCGT GTTCGATCCC GGCATCAACG CGCTGTCGAT CGTCACGCGC
ATCCTGCCGC GCGAGCTCGT GCTGCGCGAG GCGACGCTCA TCGTGCCGAG CGACGTGCAG
ACGCCGATCG CGGCCGAACT CGATTGCGCG GATACCGACG GCGTGCCGGT GCACGCGGAA
TTCGACTGGC GCCACGGCCC GGTCGAGCAA TGGGAGATCG CGGTCGACAC GGCCGACGGC
GTGCTCGCGA TCAGCCGCGG CGGCGCGCAA TTGTCGATCG CGGGCGAGCC GGTCGAGATC
GGGCCGGAGC GCGAGTACCC GGCGCTGTAT GCGCACTTCC ACGCGCTGAT CGCGCGTGGC
GAAAGCGACG TCGACGTGCG GCCGCTGCGG CTCGTCGCCG ATGCCTTCCT GTTCGGCCGG
CGCGTGCAGA CCGACGCGTT CGGCCGCTGA
 
Protein sequence
MSDPISLGVV GIGKIARDQH LPAIAAEPGF ALTACASRHA EVAGVRNYPD LRALLAAEPE 
LDAVSLCAPP QVRYAQARAA LEAGKHVMLE KPPGATLGEV AALDALARER GLTLFATWHS
RCASAVEPAR VWLAQRTIRA VQVRWKEDVR RWHPGQQWIW EPGGLGVFDP GINALSIVTR
ILPRELVLRE ATLIVPSDVQ TPIAAELDCA DTDGVPVHAE FDWRHGPVEQ WEIAVDTADG
VLAISRGGAQ LSIAGEPVEI GPEREYPALY AHFHALIARG ESDVDVRPLR LVADAFLFGR
RVQTDAFGR