| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5617 |
|---|
| Symbol | |
|---|
| ID | 4451925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2728648 |
|---|
| End bp | 2729496 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639697678 |
|---|
| Product | phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_839243 |
|---|
| Protein GI | 116693710 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.752397 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0823186 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTA TCCAGGAGCG CGTCGCGCAA GCCGTGACGC CCGAACTGAT CGCCGCGTTC
CGCGAGGAAG GCGCGGTCTG CATCAAGGGC ATTTTTTCGC CTGACGAAGT GGCCGCGCTG
CGGGCCGGCA TCGACGCGAA CCTCGCGCAA CCGAGCGAAC GCGCGAAAGT CGCGAGCCGG
CCCGACGATC CGGGCTGGTT CTTCGAGGAT TTCTGCAACT GGCAGCACAA CGACGCGTAT
CGCGATTTCA TCGTGCGCTC GCCGGCGCCG TCAGTCGCCG CCGCGCTGAT GGGCACCGAC
CACGTGCGGC TGCATCATGA TCACCTGCTC GTGAAGAAGC CCGGCACGCG GCAGCGCACG
CCGTGGCATC AGGACCAGCC GTACTACGAC ATCGAAGGCG ACGACAACGT CAGCATGTGG
ATTCCGGTCG ATCCGGTGCC GCTCGAATCG ACGCTGGAAT TCGTCGCGGG CTCGCATCGC
GGGCCGTGGC TGATGCCGCG CACGTTCATG GACAAGGAGG CGAAGTGGTT TCCGGAAGGC
AGCCTCGCCG ACCTGCCCGA CATCGAAGCC GACCGCGCGG CCTTCCCGAT TCGCCGCTGG
GCGCTCGAAC CCGGCGACAT GGTGTGCTTC CGGATGCTCA CGCTGCATGC GTCGGGCGGC
ACGCAGAACC GCCGCCGTGC GTTCTCGATC CGCTTCGTCG GCGATGATAT CCGTCACGCG
CCGCGCCGCT GGAAAACGTC GCCCGATTTC CCCGGGCTCG CGGCGCAACT GGCCGACGGC
GCACCGCTCG ATCATCCACT GTTTCCGGTG GTGTGGTCGC GCGACGCGGG GCAGGTCGGC
GCGATCTGA
|
|---|
| Protein sequence | MTSIQERVAQ AVTPELIAAF REEGAVCIKG IFSPDEVAAL RAGIDANLAQ PSERAKVASR
PDDPGWFFED FCNWQHNDAY RDFIVRSPAP SVAAALMGTD HVRLHHDHLL VKKPGTRQRT
PWHQDQPYYD IEGDDNVSMW IPVDPVPLES TLEFVAGSHR GPWLMPRTFM DKEAKWFPEG
SLADLPDIEA DRAAFPIRRW ALEPGDMVCF RMLTLHASGG TQNRRRAFSI RFVGDDIRHA
PRRWKTSPDF PGLAAQLADG APLDHPLFPV VWSRDAGQVG AI
|
|---|
| |