Gene Bcen2424_5613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5613 
Symbol 
ID4451921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2725386 
End bp2726282 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID639697674 
Productdihydrodipicolinate synthase 
Protein accessionYP_839239 
Protein GI116693706 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.292937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.171207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATCC TGTTGAAAGG CATCATTGCC TACCCGGTCA CGCCGTTCTC CGCCGACGGC 
GACGTCGACC TGACAGCGCT CGATGCGCTG ATCGAACGCC TGATCGCCGA CGGCGTTCAC
GCGATCGCGC CGCTGGGCAG TACCGGCGAA AGCGCCTACC TGTCCGACGC CGAATGGGAG
GCCGTCGCTA CCGCGTCGAT TCGCGCGGTG CGCCGGCGCG TGCCGACCGT CGTCGGAATT
TCCGATCTCA CCACGGCGGG CGCGGTGCGC CGCGCCCGCT TTGCCGAGCA GGCCGGCGCC
GATGCGGTGA TGGTGCTGCC GGTGTCGTAC TGGAAGCTCG GCAACGACGA GATCGTCGCG
CACTACCGTG CGATCGGCGA CGCGATCGGC ATCCCGATCA TGCTGTACAA CAACCCGGCG
ACGAGCGGCG TCGACATGTC GCCCGAGCTG ATCGCGACGA TCTGCCAGAC CGTCGACAAC
GTGACGATGG TGAAGGAAAG CACCGGCGAC ATCGGCCGGA TACACCGGCT CGCGCAATTG
AGCGACGGCA CGATCCCGTT CTACAACGGC AGCAATCCGA TGGCGCTCGC CGCGCTGGCC
GCCGGCGCGG CCGGATGGTG CACGGCCGCG CCGAACCTGA ATGCCGCGTT GCCGCTTGCG
TTGTTCGACG CGATGTGCGC GGGCGACCTC GCGCGCGCCC GATCGGTCTT TCACGCGCAG
TTGCCGTTGC TGCAGTTCAT CGTCAACGGC GGGTTGCCGG TGACCGTGAA GGCCGGGCTG
AGGCTGCGCG GCTTCGACGC CGGCGAACCG CGGCGACCGC TGCTGCCGCT CGGCGACGCA
CGCACACGAG AACTCGAGCG CCTGCTCGCG GCGCTGCCGG ACGGTGTGGC GGCATGA
 
Protein sequence
MSILLKGIIA YPVTPFSADG DVDLTALDAL IERLIADGVH AIAPLGSTGE SAYLSDAEWE 
AVATASIRAV RRRVPTVVGI SDLTTAGAVR RARFAEQAGA DAVMVLPVSY WKLGNDEIVA
HYRAIGDAIG IPIMLYNNPA TSGVDMSPEL IATICQTVDN VTMVKESTGD IGRIHRLAQL
SDGTIPFYNG SNPMALAALA AGAAGWCTAA PNLNAALPLA LFDAMCAGDL ARARSVFHAQ
LPLLQFIVNG GLPVTVKAGL RLRGFDAGEP RRPLLPLGDA RTRELERLLA ALPDGVAA