| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5601 |
|---|
| Symbol | |
|---|
| ID | 4453305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2714578 |
|---|
| End bp | 2715057 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639697662 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_839227 |
|---|
| Protein GI | 116693694 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.432022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGC GTATCAACTA CATTCAACAG TCACCCGAGT TGTTCAGGAA ATTCCTCGAG
CTCAGCAACC TGCTGCGCAG CAGCGCGATC GAGGAATCGA TCCGGGATCT CGTGTCCCTC
CGGGCATCCC AGATCAACGG CTGCGCGTTC TGCGTCGACA TGCACGTGAA GGAGGCACGC
ATCCACGGCG AGCGCGAGCT GCGCCTGCAT CATCTGGCGA CGTGGCGCGA ATCGACGCTC
TTCTCGCCGC GCGAGCGGGC CGCGTTGGCC TGGACGGAAG CGCTGACGAC GCTGCCCGCG
CACGGCGTGC CGGACGACCT CTACGACCGC GTGCGCGGCC AGCTCTCCGA GAAGGAATTG
TCGGACCTGA CGTTCGAAGT GATGGCGATC AACGGCTGGA ACCGCGCGAA TGTCGCGTTC
CGGACCGTGC CGGGCTCGTC CGACAAGGCG TTCGGCCTCG ACAAGGCCAA TCTCGCCTGA
|
|---|
| Protein sequence | MTQRINYIQQ SPELFRKFLE LSNLLRSSAI EESIRDLVSL RASQINGCAF CVDMHVKEAR
IHGERELRLH HLATWRESTL FSPRERAALA WTEALTTLPA HGVPDDLYDR VRGQLSEKEL
SDLTFEVMAI NGWNRANVAF RTVPGSSDKA FGLDKANLA
|
|---|
| |