Gene Bcen2424_5575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5575 
Symbol 
ID4452388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2685285 
End bp2686526 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content65% 
IMG OID639697636 
Productsodium/hydrogen exchanger 
Protein accessionYP_839201 
Protein GI116693668 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTCA TCGGATCGTC GCTTAAGCGC CTGCCGCTGA GTGCGGCCAT GGTGTATCTC 
GGGATCGGCT TTCTGGTCGG ACCGGCCGGC ACCGGCTTCC TGTCGCTGAA ATTGCCGGAC
GACGTCACGA ACTTGCGCAT TGCTGCCGAA ATCGGCTTGC TGATCTCGCT GTTCGCGATC
GGCCTGAGGC TGCGTGTCCC GCCCGCCGAT CCCCGCTGGA TGCTGCCGCT GCGGCTCGGC
GTCGTCGCAA TGATCTTCAC CGTGGCGTCG ATCGCCGCGC TCGGCGTGCT GGTGCTGAAT
TTGAATCTCG GTGTCGCGGT ACTTCTCGGC GCGATGATCG CGCCGACCGA CCCCGTGCTC
GCTCATGACG TCGGCGTGCG CGACGCGGGT GACGTCGAGC TGGTACGTTT TTCGTTGTCC
GCCGAAGGTG GGATCAACGA CGGCACGGCC TACCCGTGCG CGGTACTCGG CATGCTTTTG
TGCGGTTCCG GCACGACGTC GGCGCTTCAC TGGAGCATGG TCGGCGGCAT TGCATGGGGT
ATCGCGTCCG GTGCGGGCGC AGGCTGGCTG CTCGGCTTCG TCACGGCCCG GCTCGTCGCA
TTCCTGCGCA GCCGTCACAG CCAGGCGCTC GGCCTCGAAG GGTTCTTCGC GCTCGGCCTG
ATCATGCTGT CGTACGGTGT GGCGCTCGCC ATTCATGGCT ACGGGTTCCT GGCCGTGTTC
GCGGCGGGCG TCGCGATGCG GCGCGTCGAA CATCGAACGA GCGGCCAGAA GACGTCGAAG
GAGACGGTCG GCGTCGTGAA CAGCGAGGAT GTCGAAGCCA CCGCCACCGA TCCCGACAAA
GCCCATGCCT TCGTCGCGGA ATCGGTCATG GGATTCACAA TCGAGCTTGA ACACATCGTC
GAAGCCGTCC TGATCCTGCT GATCGGCGCG CTCGTCTCAC GGTATTGGGC TGACATGCTC
ACCTGGGCGG GCGCGGCCGT GGTCGCGACA CTGCTGTTCG TCATCCGGCC GGCCGCCACC
CAGCTTGCGC TGATCGGCTC CCGGGCGTCG CACCACCAGC GCCGGCTGAT CAGCTGGTTC
GGCATTCGCG GCGTGGGTTC CCTGTATTAC CTGATGCTGG CCATCGAGCA AGAGCCGCGC
GCGCAACTGT TGCCGATGGT TCCGTGGGTA CTGGCCATCA TCGCCGTGTC GATCGTGCTG
CACGGTATTT CAGCTGCGCC GCTGATGCGT CGTTATGCGT GA
 
Protein sequence
MGLIGSSLKR LPLSAAMVYL GIGFLVGPAG TGFLSLKLPD DVTNLRIAAE IGLLISLFAI 
GLRLRVPPAD PRWMLPLRLG VVAMIFTVAS IAALGVLVLN LNLGVAVLLG AMIAPTDPVL
AHDVGVRDAG DVELVRFSLS AEGGINDGTA YPCAVLGMLL CGSGTTSALH WSMVGGIAWG
IASGAGAGWL LGFVTARLVA FLRSRHSQAL GLEGFFALGL IMLSYGVALA IHGYGFLAVF
AAGVAMRRVE HRTSGQKTSK ETVGVVNSED VEATATDPDK AHAFVAESVM GFTIELEHIV
EAVLILLIGA LVSRYWADML TWAGAAVVAT LLFVIRPAAT QLALIGSRAS HHQRRLISWF
GIRGVGSLYY LMLAIEQEPR AQLLPMVPWV LAIIAVSIVL HGISAAPLMR RYA