Gene Bcen2424_5559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5559 
Symbol 
ID4451956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2666846 
End bp2668252 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content72% 
IMG OID639697620 
Productmajor facilitator transporter 
Protein accessionYP_839185 
Protein GI116693652 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG CCGTACCTGA TCAGGCCGCC GCGCGCCGCG TGCTCGCCGC GACCTGCGTG 
AGCTACATGC TCGTGCTGCT CGATGCGTCG ATCGTCAACG TCGCGCTCAC CGACATCGCG
CACACGTTCG GCAGCCGCGT GGCCGGTCTG CAATGGATAG TGAACGCTTA CACGCTGGCG
TTCGCGAGCC TGTTGCTGAC GGGCGGCACG CTCGGCGACC GGCTCGGCGA TCGCACCGTC
TATGTGGCGG GGCTGGCCGT CTTCGTCGCC GCGTCGGCCC TGTGCGGCGT CGCGCCGACC
TTGCCGGCGC TCGCGGTCGC CCGCGCGTTG CAAGGCGTCG GCAGCGCGAT GCTGGTGCCC
TGCTCGCTGG CGCTGATCAA TCGCGCGTTC CCCGAACCGG CCGCGCGCGC TTCGGCGATC
AGCGTGTGGA TGGGCTGCGG CGGCATCGCG ATGGCGTCGG GTCCGCTGAT CGGCGGCTTG
CTGATCGATC TGTCCGGATG GCGCAGCCTC TTCTTCGTGA ACCTGCCGCT CGGACTCGCC
GGCATCTGGC TCGGCCGAAC GGTCGCGCCC GCCGCCGTCG ACCGGTCGCG GCAGTTCGAC
TGGGGTGGCC AGGCGGCGGC CATCGTCGCG ATCGGGGCGC TGATCGGCAC GCTGATCGAA
GGCCCGTCGC TCGGCTGGCG CTCGGCGCCG ATCGTCGGCG GCGCGATGGC CAGCGTCGTC
GCGTGGATCG CGTTCATCGC GATCGAGGCG CGGCGCCGCG CACCGATGCT GCCGCTCGCG
TTCTTCCGCA ACCGGCTGTT CGCGGGATCG ACGTTCGTGT CGATGGCGTC GGCGTTCGTG
TTCTACGGCT TGCTGTTCGT GCTCAGCCTG TTCTATCGGC AGGTTCGCGG CGCCAGCCCG
CTCGATACGG GGCTCGCGTT CCTGCCGATG ACCGCGATGG TCGCGCTCGG CGGCCTCACC
TCGGGGCGGG TCGTTGCACG CTTCGGCGCG CGCGGGACGA TGTGCGCGGC GTTCGGGCTC
TACGCGGCGG GCGCGCTCGG GATAACGGCC ATCGGCGCGA CGACGCCCGC GTGGCTTGCG
GTCGCGCCGA TGCTCGCGAT CGGTTTCGCA TCGGGCTTCA TCTCGCCGGC CGCGACGGCG
CCGGCGCTCG GGACGATCGA TCGGCCGCGC GCCGGCGTGG CGGCAGCCGT GCTGAACGCG
GCACGGCAAA GCGGATCGGC GCTCGGCGTC GCAATTTTCG GCGCGTGCAT CGCGACGCTG
CAACCGTTCC CGGTGGCGGT ACGGGTGGTG CTGACGTTGG CCGCCGGATT GTCGGTGCTC
GCCGCGGCAA CGTGGTGGCT GACGGCGCAG GCAGCGCCAG CAACTGCCGA AACGACCGCC
CCTCTGCGAG CCGCCGCGCG CCGCTAG
 
Protein sequence
MTAAVPDQAA ARRVLAATCV SYMLVLLDAS IVNVALTDIA HTFGSRVAGL QWIVNAYTLA 
FASLLLTGGT LGDRLGDRTV YVAGLAVFVA ASALCGVAPT LPALAVARAL QGVGSAMLVP
CSLALINRAF PEPAARASAI SVWMGCGGIA MASGPLIGGL LIDLSGWRSL FFVNLPLGLA
GIWLGRTVAP AAVDRSRQFD WGGQAAAIVA IGALIGTLIE GPSLGWRSAP IVGGAMASVV
AWIAFIAIEA RRRAPMLPLA FFRNRLFAGS TFVSMASAFV FYGLLFVLSL FYRQVRGASP
LDTGLAFLPM TAMVALGGLT SGRVVARFGA RGTMCAAFGL YAAGALGITA IGATTPAWLA
VAPMLAIGFA SGFISPAATA PALGTIDRPR AGVAAAVLNA ARQSGSALGV AIFGACIATL
QPFPVAVRVV LTLAAGLSVL AAATWWLTAQ AAPATAETTA PLRAAARR