Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5542 |
Symbol | |
ID | 4453387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2649765 |
End bp | 2651378 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639697603 |
Product | extracellular solute-binding protein |
Protein accession | YP_839168 |
Protein GI | 116693635 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.390888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCT TGCATGCCAT GTCGGCCGTG CTGGCCGCGC TCGCCCTGAC GACGCCCGTC GCCCACGCCG TGACCGTTCC GTCGAACGTC GCACTCGCTC CCCAACAGGA CCTGACGCGA CAGGTGCCGG CCGAAGTCGA GTCGCTCGAC CCGGCGCACA TCGAATCGTG GACCGGCAAC ACGATCGGCC TCGACCTGTT CGAAGGGCTC GCGCGCATCG ACGCGGCCGG CCAGGTCGTG CCGGGCGTCG CGCTGTCGTG GGAGCGCAAG ACGCCGCAGA CGTGGATCTT CAAGCTTCGC CACGACGCGA AGTGGAGCAA CGGCCAGCCG GTGACGGCCG CCGATTTCGT CTATTCGTGG CAGCGCCTCG TCGATCCGAA GACGGGCTCG AAATACACGA TCCTCGTCGA GTTCATCAAG AACTCGAAGG ACATCATCGC CGGCAAGGCC GCGCCGACCA CGCTCGGCGT GCGCGCGGTC GACCCGTACA CGCTGGAAGT GACGACCGAC GTGCCCGTCG CGTTCTTCCC CGAACTGACC GCGATGGCGC CGCTCGCGCC GGTGAACAAG GACGTGGTGA CGAAGTTTGG CGACGCATGG ACGCGCCCCG GCAACCTGGT CAGCAACGGC GCGTACCAGC TCGTCGACTG GCAGCCGAAC AACCGCATCG TGGCGACCAA GGACGCGAAG TACTGGAACG CGTCGAAGGT GGTGATCAAC AAGGTCACGT ACCTGCCGAT CGAAAGCGAC GAAACCGCGA TGCGCATGTA CCAGGCCGGC CAGATCGACT ACAGCTACTC GATCCCGTCG GGCATCTTCC AGCAGGTCAG CAAGCAGTTC GGCGCCGAAC TGCGCCCGGG CCTGCAGCTC GCGACCTACT ACTACTACCT GAACAACAGC GACGCGGCGC TGAAGGACAA GCGCGTGCGC CAGGCGCTGT CGATGGTGAT CGATCGCGAC GTGCTGACGT CGAAGCTCAC GCAGGCCGGC GAGAAGCCGA TGTACGGGCT GATGCCGAAC GGCACGAAGG GCGTGCAGCC ATTCACGCCG GAATGGGCGT CGTGGCCGAT GGCCAAGCGC ATCGCGACCG CGAAGGACCT GCTGAAGCAG GCCGGCTATT CGGATGCGAA GCCGCTGTCG TTCACGCTCA CGTACAACAC CAACGACCTG CACAAGAAGG TCGCGCTGTT CACCGCATCG GAATGGCGTA CGAAGCTCGG CGTCACCACG AAGCTCGAGA ACGTCGAGTT CAAGGTGCTG ATGAAGCAGC GGCATGACGG CAAGGTGCAG ATCGCGCGCG ACGGCTGGTT CGCCGACTAC AACGACGCGA TGACGTTCTT CGACCTGATC CGCTGCGGCA GCTCGCAGAA CACCGTCGGC TACTGCAACA AGCAGGTCGA CGCGCTCGTC GAGGAAGGCA ACCAGAAGCT CGACGACAAC GCGCGCACCG CGCTGCTCAC GCAGGCGCAC GACATGGCGA TGAAGGACAC GCCGATGGTG CCGCTGTTCC AGTACTCGGC CGACCGTCTC GTGAAGTCCT ACGTCGGTGG CTATTCGCTG AAGAACGTGA TCGACATGCG TGCTTCGCAG GACATGTACC TGATCAAGCA CTGA
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Protein sequence | MKSLHAMSAV LAALALTTPV AHAVTVPSNV ALAPQQDLTR QVPAEVESLD PAHIESWTGN TIGLDLFEGL ARIDAAGQVV PGVALSWERK TPQTWIFKLR HDAKWSNGQP VTAADFVYSW QRLVDPKTGS KYTILVEFIK NSKDIIAGKA APTTLGVRAV DPYTLEVTTD VPVAFFPELT AMAPLAPVNK DVVTKFGDAW TRPGNLVSNG AYQLVDWQPN NRIVATKDAK YWNASKVVIN KVTYLPIESD ETAMRMYQAG QIDYSYSIPS GIFQQVSKQF GAELRPGLQL ATYYYYLNNS DAALKDKRVR QALSMVIDRD VLTSKLTQAG EKPMYGLMPN GTKGVQPFTP EWASWPMAKR IATAKDLLKQ AGYSDAKPLS FTLTYNTNDL HKKVALFTAS EWRTKLGVTT KLENVEFKVL MKQRHDGKVQ IARDGWFADY NDAMTFFDLI RCGSSQNTVG YCNKQVDALV EEGNQKLDDN ARTALLTQAH DMAMKDTPMV PLFQYSADRL VKSYVGGYSL KNVIDMRASQ DMYLIKH
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