| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5537 |
|---|
| Symbol | |
|---|
| ID | 4453382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2644249 |
|---|
| End bp | 2645685 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639697598 |
|---|
| Product | outer membrane porin |
|---|
| Protein accession | YP_839163 |
|---|
| Protein GI | 116693630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00176042 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTG CCTGGGGACT GCCGGCGCTC GCCGGCGTGT CGCTGACGGG CGTCGCGCAC
GCCGACGACG CGGCCTCCGC GCCGCTGACG GTCGCGCAGG CCGCGCCGGC CGCCGGGTCG
GGCGCATCCG TTGCGCAGGC AACGACCCCG AACGCCATTG TCAACGCCGA GGCGAGCCAG
GCCGTCACGC CGCCCGACGA GCCGTCGGCG CAGTCGAAGT CGAACGGCTT CATCGCCGAC
AGCCATCTCG ACTTCCTGTT CCGCAACTAT GCGGACGTGC TTGACAACAA GGGCGGCCCG
CATCGTCATG CGTGGGTCCA GGGCGCGATG GCGAACTTCG AGTCGGGCTA CACGACCGGC
CTGATCGGGA TCGGCTTCGA TGCGTCGTTG TATGCGGCGC TGAAGCTCGA CGGCGGCCAG
GGCGCCGGCA GCATGGTGCA CATCGCGAAG GGCGGCGGCG GCGGCAACCA GCTCGCGTGG
GCCTACCCGG GCATCTACGA CGTCAAGGCG CGCATCTCGA ACACGGTGGT CAAGTACGGT
CTGCAGGCCG TCGACAACCC GTTCATGGAG CAGCACGACA ACCGTGCGCT GCCGCCGACG
TTCCTCGGCG CGACGCTCGT CAGCAATGAA TTCAAGAACG TGATGCTCGA GGCCGGCAGC
TTCACGAAGA CCGACGCGCG CGGCCATACG ACGCTCACCA ACCTGACGAC GCAATACGGC
GGCACGCGCA TCAATCGCCT GACCTACGTC GGCGGCACGT GGGACTACTC GCCGAACGGC
GAAGTCGCGC TGTACGCGAA TCAGGCCGAC GACGTGTGGC ACCAGTACTA CGCGTCGGTG
AAGCACAGCA TCGGCAGCCC GCAGACGATC AAGTGGACCG GCTTCGGCAA CGTCTACTCG
ACGCACGACA CGGGCGATGC GCTGCAAGGC AAGATCAACA ACAACGCGTA CAGCCTGTCG
CTGGCCGCGC AGCATGGCCC GCATGAACTG CTGCTCGGCT TCCAGCAGGT GCTCGGCGAC
CAGTTCTTCG ACTACCTGAA CGAAACGAAC GGCATCTTCC TGGCCAACTC GATGGACGTC
GACTACAACG CGCCGCACGA AAAATCGCTG CAACTGCGTT ACACGTTCTA CGGCAAGGAC
GCCGGCCTGC CGGGCTTCAA GGCGATGGTG TGGGGCGTGA CGGGCTGGGG CGCGGACGGC
AGCGCGGGCG CGGCGAACGA TCCGAGCAAG TCGAGCATCT ACTGGAGCAA TGGCGCGCCG
GTGCAGGGCC GTCACCACGA GTTCGGCTTC ATCCCGTCGT ACACGTTCCA GAGCGGCAAG
CTGAAGAACA CGAAGGTCAC GTTCATCGCG ATGTGGCACG CCGGCTCGGC CCACTACTCG
GACGCGACGA ACACCGAGTA CCGTCTGGTC GTGAACCTGC CGCTGCACGC GTTCTGA
|
|---|
| Protein sequence | MLLAWGLPAL AGVSLTGVAH ADDAASAPLT VAQAAPAAGS GASVAQATTP NAIVNAEASQ
AVTPPDEPSA QSKSNGFIAD SHLDFLFRNY ADVLDNKGGP HRHAWVQGAM ANFESGYTTG
LIGIGFDASL YAALKLDGGQ GAGSMVHIAK GGGGGNQLAW AYPGIYDVKA RISNTVVKYG
LQAVDNPFME QHDNRALPPT FLGATLVSNE FKNVMLEAGS FTKTDARGHT TLTNLTTQYG
GTRINRLTYV GGTWDYSPNG EVALYANQAD DVWHQYYASV KHSIGSPQTI KWTGFGNVYS
THDTGDALQG KINNNAYSLS LAAQHGPHEL LLGFQQVLGD QFFDYLNETN GIFLANSMDV
DYNAPHEKSL QLRYTFYGKD AGLPGFKAMV WGVTGWGADG SAGAANDPSK SSIYWSNGAP
VQGRHHEFGF IPSYTFQSGK LKNTKVTFIA MWHAGSAHYS DATNTEYRLV VNLPLHAF
|
|---|
| |