Gene Bcen2424_5529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5529 
Symbol 
ID4452184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2633371 
End bp2634858 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content70% 
IMG OID639697590 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_839155 
Protein GI116693622 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACG ACTGGGCGCG CCTGCCCGTC AACTACGGCG ACGTGCTGCG GCGCGCCGCC 
GAGTCGCTAT TCCGGACCTT CGAGGATTCG AGTGCGGGCA CGGTGGTCGT CGATCGCGAC
GCGCGCGTCG TGTGGATGAA CGAGCGTTAC GCGGCACGCT TCGGTTTCGC CGATCCGCAG
CAGGCCGTCG GCCTCGACTG CGAGGCCGTG ATCCCGAACA GTCTGATGCG GGAAGTCGTG
TCGACCGGGC AGCCGATCCT GCTCGACATC ATGGAGACGG GCCGCGAGCC GCTCGTCGTC
ACGCGCCTGC CGTTGAAGAA CGAGGCCGGC GAAACGGTCG GCGCGATCGG CTTCGCGCTG
TTCGACCAGT TGAAGACCCT CACGCCGATT TTTTCCCGCT ACGCGCAGCT TCAGCAGCAG
CTGATCGCGA CGCAGCGCTC GCTCGCGCAG GCGCGCCGCG CGAAATACAC GTTCGCGAGC
TTCGTCGGCA CGAGTGCCGC GAGCCTCGAG ACCAAGCGCC AGGCGCGCCG CGCGGCGCAA
GTCGATTCGC CGGTGCTGCT GCTCGGCGAG ACGGGCACCG GCAAGGAACT GCTCGCCCAC
GCGATTCACG CGGCGTCGGC GCGTGCGCTG CAGCCGCTCG TGACCGTCAA CGTCGCCGCG
ATTCCCGACA CGCTGCTCGA AACCGAATTC TTCGGCGCGG CGCCCGGCGC GTACACCGGC
GCCGATCGCA AGGGGCGCGT CGGCAAGTTC GAACTGGCCG ATCGCGGCAC GCTGTTTCTC
GACGAGATCG GCGACATGCC GCTGCCGTTG CAGGGCAAGC TGCTGCGCGT GCTGCAGGAC
AAGGAGTTCG AGCCGGTCGG TTCGAACCGG ATCGTGCGCG CGGACGTGCG CATCATCGCC
GCCACGTCGG CCGACCTGCC GGCGCTGGTG GCGGCTGGGC GTTTTCGCGC GGATCTCTAT
TACCGGCTGA ACGTGCTGAC GATCCATGCG CCGCCGCTGC GCGAACGCGC TTCCGACATC
GCGGCGCTCG TCTACGCGAC GCTCGAGGAG CTGGCCGCGC AGCACGGGCG CGCCGCACAC
TGCGAACTGA CCGACGATGC GTTGCGGATG CTGTGCGCGT ATCCGTGGCC CGGCAACGTG
CGCGAGTTGC GCAATACGCT CGAGCGCGCG CTGATGCTGT CGGATCGCTC GGTGATCGAT
GCGCGCGCGC TCGCGCCGTT TCTCGGGCCG GTGCGCATTT CGCCGGACGG CGCTGCGCCG
GCGCAGCGGG TTGGCGCGGT GCCGGCCGAG CAGCGCGCGG GCGATGCCCC GACGGCATCC
GGTGCGCCGG CCGTCTCGTA TGCCGATGCA CTGGCGGCGT GGGAGCGCCA GTTCCTGACC
GATGCGCTCG CGGCCTGTGA CGGCAAGGTC GTCGACGCGG CTGCGCGTAT CGGCATCGGC
CGCGCGACGC TGTACAAGAA ACTGGCGGCG CTGGGCATCG ACCGGTAG
 
Protein sequence
MMNDWARLPV NYGDVLRRAA ESLFRTFEDS SAGTVVVDRD ARVVWMNERY AARFGFADPQ 
QAVGLDCEAV IPNSLMREVV STGQPILLDI METGREPLVV TRLPLKNEAG ETVGAIGFAL
FDQLKTLTPI FSRYAQLQQQ LIATQRSLAQ ARRAKYTFAS FVGTSAASLE TKRQARRAAQ
VDSPVLLLGE TGTGKELLAH AIHAASARAL QPLVTVNVAA IPDTLLETEF FGAAPGAYTG
ADRKGRVGKF ELADRGTLFL DEIGDMPLPL QGKLLRVLQD KEFEPVGSNR IVRADVRIIA
ATSADLPALV AAGRFRADLY YRLNVLTIHA PPLRERASDI AALVYATLEE LAAQHGRAAH
CELTDDALRM LCAYPWPGNV RELRNTLERA LMLSDRSVID ARALAPFLGP VRISPDGAAP
AQRVGAVPAE QRAGDAPTAS GAPAVSYADA LAAWERQFLT DALAACDGKV VDAAARIGIG
RATLYKKLAA LGIDR