| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5516 |
|---|
| Symbol | |
|---|
| ID | 4453465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2619604 |
|---|
| End bp | 2620776 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639697577 |
|---|
| Product | methylcitrate synthase |
|---|
| Protein accession | YP_839142 |
|---|
| Protein GI | 116693609 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0272926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA CGAAAGACGC AGCAGCACCG GCCGCCGCAG GCGCATTCAA GCCGAAGAAG
TCGGTGGCGC TGTCGGGCGT GACGGCCGGC AACACCGCGC TGTGCACGGT CGGCAAGACC
GGCAACGACC TGCACTATCG CGGCTACGAC ATTCTCGACG TCGCCGAATC GTGCGAATTC
GAGGAAATCG CGCACCTGCT GGTGCACGGC ACGCTGCCGA ACCTGACGGA ACTGGCCGCC
TACAAGACTA AGCTGCGCGC GCTGCGCGGC CTGCCGAGCG CGCTGAAGGC CGCGCTCGAA
CAGATTCCGG CGTCGGCCCA CCCGATGGAC GTGATGCGCA CCGGCGTGTC GGTGCTCGGC
ACCGTGCTGC CGGAGAAGGA CGACCACAAC CTGCCGGGCG CGCGCGACAT CGCCGACCGC
CTGATGGCGT CGCTCGGCTC GATGCTGCTG TACTGGTATC ACTTCTCGCA CAACGGCAAG
CGCATCGAGA CGGAAACCGA CGACGACTCG ATCGGCGGCC ACTTCCTGCA CCTGCTGCAC
GGCAAGACGC CGTCGAAGTC GTGGGTCGAG GCGATGCACA CGTCGCTGAT CCTGTACGCC
GAGCACGAAT TCAACGCGTC GACGTTCACG GGCCGCGTGA TCGCGGGCAC GGGCTCGGAC
ATCTACTCGG CGATCACCGG CGCGATCGGC GCGCTGCGCG GGCCGAAGCA CGGCGGCGCG
AACGAAGTCG CGTACGAGAT CCAGAGCCGC TACAGCTCGC CGGACGACGC CGAAGCCGAC
ATCCGCCGCC GCGTCGAGAA CAAGGAAGTC GTGATCGGCT TCGGCCATCC GGTCTACACG
ATCTCCGATC CGCGCAACAA GGTGATCAAG GGCGTCGCGC ACAAGCTGTC GAAGGAAGCG
GGCGATACCA AGCTGTACAG CATCGCCGAG CGCCTGGAAT CGGTGATGTG GGACGCGAAG
AAGATGTTCC CGAACCTCGA CTGGTTCAGC GCGGTGTCGT ATCACATGAT GGGCGTGCCG
ACCGCGATGT TCACGCCGCT GTTCGTGATC TCGCGCACGT CGGGCTGGAG CGCGCACATC
ATCGAGCAAC GCATCGACAA CAAGATCATC CGTCCGAGCG CGAACTACAC CGGTCCGGAA
GACCTGCAGT TCGTGCCGAT CGAGAAGCGC TGA
|
|---|
| Protein sequence | MSETKDAAAP AAAGAFKPKK SVALSGVTAG NTALCTVGKT GNDLHYRGYD ILDVAESCEF
EEIAHLLVHG TLPNLTELAA YKTKLRALRG LPSALKAALE QIPASAHPMD VMRTGVSVLG
TVLPEKDDHN LPGARDIADR LMASLGSMLL YWYHFSHNGK RIETETDDDS IGGHFLHLLH
GKTPSKSWVE AMHTSLILYA EHEFNASTFT GRVIAGTGSD IYSAITGAIG ALRGPKHGGA
NEVAYEIQSR YSSPDDAEAD IRRRVENKEV VIGFGHPVYT ISDPRNKVIK GVAHKLSKEA
GDTKLYSIAE RLESVMWDAK KMFPNLDWFS AVSYHMMGVP TAMFTPLFVI SRTSGWSAHI
IEQRIDNKII RPSANYTGPE DLQFVPIEKR
|
|---|
| |