| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5504 |
|---|
| Symbol | |
|---|
| ID | 4453453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2604711 |
|---|
| End bp | 2605763 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639697565 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_839130 |
|---|
| Protein GI | 116693597 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.314744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGA ATGCACCGCT TGCCGGTATC CACATCGTCG AATTCGAAGG TCTCGGCCCC
GGCCCGCTCG CGGGCTGGAT GCTCGCCGGC ATGGGTGCGC GCATCACGCT GATCGCGCGC
CCGTCCGGCC GCACGAGCGC GCCGGACGCG CTGCGGGCTC GCGACGGCGA CTTGTTGCGC
GAAGGCAAGA CGATCGTCGA ACTCGACCTG AAGGCGCCGG CCGGGCGTGA CGCCGCGCTC
GACCTGATCG CGCAGGCCGA TGCGTTGATC GAGGGCTTGC GGCCCGGCGT GATGGAGCGG
CTCGGCCTCG GGCCCGACGC TTGCGCGCGC CGCAATCCGA AGTTGGTCTA CGGGCGCATG
ACGGGCTGGG GCCAGGATGG ACCGCTCGCG GCCGCGGCCG GGCACGACCT GAACTACGTC
GCGCTGACCG GGCTGCTGTC GCTGTCCGCG CCGCGCGACG GCCGGCCGGG CGTGCCGCCG
ACCGTCGTCG GCGATGCGGG CGGCGCGCTC GGGCTTGCGT TCGGCATCGT CTGCGCGTTG
CTCGACGTAC GCGGCGGCGG GCCGGGGCGC GTGGTCGACG GCGCGATCGT CGACATCGTG
TCGATGCTCG GTTCGCTCGC ATTGTGGGCG CGCGCGAACG GGCAGCTCGA CGGCGCGCAG
CCGAGCCTGT TCCACGACGC GCCGTTCTAC GACGTGTATC GCTGCGCGGA CGGCGAATGC
GTGACGATCG GCGCGCTCGA GCCGCCGTTC TATGCGCTGC TGGTCGAACG GCTCGGGCTG
ACCGACGTCG ATCCCGCGTC GCAGTACGAC CGCGCGCACT GGCCTGCGCT GAAGGCGCGT
TTCGCGGAGG TGTTCGCGCA GCAGCCATCC GCGCACTGGC GCGCGCTGCT CGAAGGCACC
GATGCGTGTT TCGCGCCGGT GCTGAGCGTG GTCGACGCGG CCGTGCACCC GCACAACGCG
GCGCGCGGGA TCTATCGGAC CGATGAGCAC GGGAACGTGC GGGCGCGGGT GGCGCCGCGG
TTTTTGCCGT TGGCGGGGGA TGAGACAGAC TAG
|
|---|
| Protein sequence | MSLNAPLAGI HIVEFEGLGP GPLAGWMLAG MGARITLIAR PSGRTSAPDA LRARDGDLLR
EGKTIVELDL KAPAGRDAAL DLIAQADALI EGLRPGVMER LGLGPDACAR RNPKLVYGRM
TGWGQDGPLA AAAGHDLNYV ALTGLLSLSA PRDGRPGVPP TVVGDAGGAL GLAFGIVCAL
LDVRGGGPGR VVDGAIVDIV SMLGSLALWA RANGQLDGAQ PSLFHDAPFY DVYRCADGEC
VTIGALEPPF YALLVERLGL TDVDPASQYD RAHWPALKAR FAEVFAQQPS AHWRALLEGT
DACFAPVLSV VDAAVHPHNA ARGIYRTDEH GNVRARVAPR FLPLAGDETD
|
|---|
| |