Gene Bcen2424_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5500 
Symbol 
ID4451667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2601698 
End bp2603317 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content71% 
IMG OID639697561 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_839126 
Protein GI116693593 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAA AAATCAAGCT CGCGTCGGGT CTGCTCGGCG TGTTGACCGT GTTCTGCCTC 
TTCCTGTTCG CGATCGAAGC GCTCGGCTTC TGGGCGCTCA CGTCGACGCG CAGCGGCGTC
GACGATCTGT CGAACGTCGC GATCGCGCAG GTCGACGCGG CCAGCCGGGC GACCGAGCAA
CTGCTCGACG CGCGCATCAA CCTGTCGCGT GCCGGCACGC GGATGGTGCG CGGCGGGCCG
AAGCCCGAGG ACATCATCCG TCACGCGGGC ACGTCGCTCG CGGAAGCGGA CAAGGCGTTC
GCGGTACTGA CGGCCGCGCA GGCGGTCGAC GACACCAACC GCGCGCGCGT CGCGGCGCTC
ACCGAGCGCT ATCGCGCGCT GCGCGGCGCG CTGGGCGAGC TCGTGCAGTT CCTCGACGCC
GACAACATCC AGGCGTTCCT CGACCAGCCG ACCCAGGGCT TCCAGGACGC GTACATCGCC
GAGCTGCATC GCTTCACCGA CTATGGCGGC ACGTCGAGCC GCGCGGCGCT CGACACGATC
GACGGCGGCA TGCTGTGGTT CAAGTCGGTC GGCATCGTGC TGCTGGTGGC GATGCTCGCG
GCGAGCGCCG CGATCTACGC GGCCGCGCGG CGCGCGGTCG TCGCGCCGCT GGAGCAGGCC
GGCCGCCATT TCGAGCGGAT CGCGCAGGGC CGTCTCGACG AAGCCGTGCA GGCGGGCGGC
GTGTTCGAGA TCGACCGGAT GCTGCGCGCC CTCGGCGCGA TGCAGACGAG TATCGCGGGC
ACCGTGCGCA CGGTGCGCCA GGCGTCCGAT GCGATCCACC TCGGCGCGGG CGAGATCGCG
GGCGGCAACG CCGACCTGTC GGCGCGCACG GGCACGCAGG CCGCGTCGCT TGAGGAAACC
GCCGCGAGCA TGGAGGAATT GACCGCGACC GTCCGGCAGA ACACCGACAG CGCGCGCGCG
GCGAGCGCGC TGGCCGACGC GGCGCTCGAA GCGACGAGCC ACGGCGGCGG CGTGGTCGAC
AGCGTGATCG ACCGGATGCG CGGCATCGCG CAGAGCTCGG GGCGCATCGC GGAGATCATC
TCGGTGATCG ACGGCATCGC ATTCCAGACC AACATCCTCG CGCTGAACGC GGCGGTCGAG
GCCGCGCGGG CCGGCGAACA GGGGCGCGGC TTCGCGGTGG TCGCGGGCGA AGTGCGCTCG
CTCGCGCAGC GCAGCGCGCA ATCGGCGAAG GAGATCAAGG CGCTGATCGA GGATTCGGTC
GCGCAGATCA ACGGCGGCGC GGAACTCGTC GAGCGCGCCG GCGACGCGAT GCGCACGGTG
TCGGCGTCGA TCACGCGCGT CGTGCAGACG ATGTCGGAGA TCACGGCGGC GTCGGTCGAG
CAGAGCGTCG GGATCGAGCA GGTGAACCAG GCCGTCACGC AGATGGATCA GCTCACGCAG
CAGAATGCGG CGCTGGTCGA GGAAGTCGCG GCGGCGGCCG CATCGCTGAA CGACCAGACC
GCGCACCTGA TGCAGGCGGT GTCGGTGTTC GAACTGGGCG ACGGACGCGT CGCCCACGGC
GGCCGCGCGG CGCCGTCGTT CGCCGCGACG GATTACGAAC CGGTCGGCAG CGCCGCGTAG
 
Protein sequence
MFGKIKLASG LLGVLTVFCL FLFAIEALGF WALTSTRSGV DDLSNVAIAQ VDAASRATEQ 
LLDARINLSR AGTRMVRGGP KPEDIIRHAG TSLAEADKAF AVLTAAQAVD DTNRARVAAL
TERYRALRGA LGELVQFLDA DNIQAFLDQP TQGFQDAYIA ELHRFTDYGG TSSRAALDTI
DGGMLWFKSV GIVLLVAMLA ASAAIYAAAR RAVVAPLEQA GRHFERIAQG RLDEAVQAGG
VFEIDRMLRA LGAMQTSIAG TVRTVRQASD AIHLGAGEIA GGNADLSART GTQAASLEET
AASMEELTAT VRQNTDSARA ASALADAALE ATSHGGGVVD SVIDRMRGIA QSSGRIAEII
SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRS LAQRSAQSAK EIKALIEDSV
AQINGGAELV ERAGDAMRTV SASITRVVQT MSEITAASVE QSVGIEQVNQ AVTQMDQLTQ
QNAALVEEVA AAAASLNDQT AHLMQAVSVF ELGDGRVAHG GRAAPSFAAT DYEPVGSAA