Gene Bcen2424_5498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5498 
Symbol 
ID4451665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2599802 
End bp2600500 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID639697559 
ProductMgtC/SapB transporter 
Protein accessionYP_839124 
Protein GI116693591 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.178344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCA ACCTGGAACT CGTGATGCGG CTCGTTCTCG CGGCGGCGCT CGGCAGCGTC 
ATCGGCTTCG AGCGCGAGCG CCTGTCGTGG GCGGCCGGCC TGCGCACGCA CATGCTGGTG
TGCGTCGGCT CGACGCTGAT CATGATCGTG TCGGCGTTCG GTTTTGCCGA CGTGCTCGGC
ACCAGCGACC ACGTCGTGCT CGATCCGTCG CGGATCGCCG CGCAGGTCGT ATCGGGCATC
GGCTTCCTCG GCGCGGGTTC GATCCTGCTG CGCGGCGAGA TCGTGCGCGG GCTGACGACG
GCCGCGAGCC TGTGGTCGGT CGCGGCGATC GGCCTGGCGG TGGGCGGCGG GCTCTATGTC
GCGGCGATTT CCGCGACGAT CATCATCCTG ATCATCCTGG CCGGCATCAA GCCGCTGGAG
CGGCGCTATT TCACGGTGCG CCAGCGGCGC CAGCTTGCGT TGACGGTCGC GAGCGGCACG
CTGACGTTCG ATTCGCTGCA CGCGGCGCTC GGCCCGGACA GTGCGCGCGT GAAGCAGTTC
ATCGTGCAGC GTGCCGACGA CGCGGGGGAG CAGGACGAGG TGCGCATCGC GCTGGCGCGC
GTATCGGAAC TCGAATACAA GGCCATCTGC GCCAAGCTGC GCGCGCTGCC CGGCGTCACG
CGCTTCGACG GCGGGAACGG GCTGGCGGGC GACGAATAG
 
Protein sequence
MLSNLELVMR LVLAAALGSV IGFERERLSW AAGLRTHMLV CVGSTLIMIV SAFGFADVLG 
TSDHVVLDPS RIAAQVVSGI GFLGAGSILL RGEIVRGLTT AASLWSVAAI GLAVGGGLYV
AAISATIIIL IILAGIKPLE RRYFTVRQRR QLALTVASGT LTFDSLHAAL GPDSARVKQF
IVQRADDAGE QDEVRIALAR VSELEYKAIC AKLRALPGVT RFDGGNGLAG DE