Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5489 |
Symbol | |
ID | 4451656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2584985 |
End bp | 2585881 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639697550 |
Product | LysR family transcriptional regulator |
Protein accession | YP_839115 |
Protein GI | 116693582 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.407046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACC TGTATCCGAA CGTGGCGGAG CTGCATGCCT TCGCCACGTC CGCGAAGTAT TTGAACTTCT CCTATGCGGC CCGGGAACTG GGCCTGACGC CGAGCGCGGT CAGCCGGCAG ATCGCGAACC TCGAGGCGCT GTTCGGCGTG AAGCTGTTCG TGCGCGAGGG GCGCGGCCTC GCGCTCACTC GGGCGGGCCA GGTGTATCAC GCGCGCGTCG TCGGGCCGCT GCGCGAAATC GGCAACGCGT CGATCGAACT GCTGAGCGCA CGGGAGAACA GCGACCTGCT GACGATCGCG AGCGTGCCGA CGTTCACGAC CAAGTGGCTG CTGCCGCGGC TCACGCGCTT TCTCGCCGCC GCGCCGGGCG TCACGCTGAG CTTTCGCCGC CATCTCGCGC CCGGCGACGT GTTTCCGTTC GGGCTCGACG CGGCGATCCG CTACGGCGAC GGCGGATGGG AAGGCGTGCG AAGCGACTAT CTGGGTGGGC GGACCTTCGT GCCGGTCTGC TCGCGCGAAT TCGCCGACCG GCATGCATTG CATGTGCCCG CCGACGCGGC GGCGGCGCCG CGCCTCGTGC ACGAGCAGGC GGAGATCGCG TGGTCCGCGT GGGCGGAACG TCATCGCGCG ACGCAGATGA ACGCGCTGGC CGGGCCGCGC TTCGAGCAGT ATTCGGTGCT GATCCAGGCG GCGCAGGCCG GGCTCGGGAT CGCCCTCGTG CCGCGCTTCC TGATTCTCGA CAATCTCGCG GCGGGCACGC TGGTCGAGCC GTTCGACGCA CCGGTCGACG TGGACGCGCA GGGGCACTAC CTGTGCTACG CGCCGGAGCG CCTCGACACG AGCGATGCGT TGCGGCGCTT CAGGGAATGG ATGCTGGACG AAGCGGCGCG CGCGTAA
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Protein sequence | MKHLYPNVAE LHAFATSAKY LNFSYAAREL GLTPSAVSRQ IANLEALFGV KLFVREGRGL ALTRAGQVYH ARVVGPLREI GNASIELLSA RENSDLLTIA SVPTFTTKWL LPRLTRFLAA APGVTLSFRR HLAPGDVFPF GLDAAIRYGD GGWEGVRSDY LGGRTFVPVC SREFADRHAL HVPADAAAAP RLVHEQAEIA WSAWAERHRA TQMNALAGPR FEQYSVLIQA AQAGLGIALV PRFLILDNLA AGTLVEPFDA PVDVDAQGHY LCYAPERLDT SDALRRFREW MLDEAARA
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