Gene Bcen2424_5484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5484 
Symbol 
ID4451354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2580434 
End bp2580988 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content72% 
IMG OID639697545 
Producthypothetical protein 
Protein accessionYP_839110 
Protein GI116693577 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCGCCA ACGACGTCAT TGAATGCGCG TGGTCCGAAC CGGCACGCGA CGCGCTCGCA 
CGACTCGCGC AACGGCAACG CGGCACGCAC CGGCACCGGA TGCCGGTCGG CGTGATCGGC
CCGCGCGATG CGACGGATGA ACAGATGCGG GTCGCGGAGC GGATCGCGCA TGCGGTGGCG
GCCACGGGTA TCGCGCTCGT CGGCGGCGGC AAGCAGGGCG TGATGGAGGC CGCCGCGCGC
GGTGCGCACG CGGCCGGCGG CTGCGCGATC GGGCTGTTGC CCGAAGACGA TGCGACGCTG
GCGAATCCGT ACCTGAGCGT CGCGCTGCCG ACCGGGCTCG GCATCACGCG CAATGCGCTG
GTCGCGCGTG CGTCGGTGTG CCTGATCGCG GTGGGCGGCG GGCTCGGCAC GCTGTCCGAA
ATCGCGCTCG GGTTGCAGTG GGGCAAGCCG GTGTTCACGA TCTGCGGTGC GCCGCAGGTC
GCGGGCGTCG AGTGCTTCGA CGAAGCGGAC GGGCTCGTCC TGCGGGTCGC GCAATGGCTG
GCCGATTTCG CGTAG
 
Protein sequence
MFANDVIECA WSEPARDALA RLAQRQRGTH RHRMPVGVIG PRDATDEQMR VAERIAHAVA 
ATGIALVGGG KQGVMEAAAR GAHAAGGCAI GLLPEDDATL ANPYLSVALP TGLGITRNAL
VARASVCLIA VGGGLGTLSE IALGLQWGKP VFTICGAPQV AGVECFDEAD GLVLRVAQWL
ADFA