Gene Bcen2424_5475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5475 
Symbol 
ID4451345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2573168 
End bp2574181 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID639697536 
Productthreonine aldolase 
Protein accessionYP_839101 
Protein GI116693568 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.309073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.398909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT TACGCAGCGA TACCGTGACA CGTCCGGGCC AGGCGATGCT GGCCGCCATG 
ACCGCCGCCG AAACCGGCGA CGACGTCTGG GGTGACGACC CGACCGTCCT GCGCCTGCAG
GCGGTGACGG CCGAGCGGGC CGGCAAGGAA GCCGGCCTGT TCTTCCCGAG CGGCACGCAG
AGCAACCTGG CCGCGCTGAT GTCGCATTGC GAGCGCGGCG ACGAGTACAT CGTCGGTCAG
CTCGCGCACA CCTACAAGTA CGAAGGCGGC GGCGCGGCCG TGCTGGGCAG CATCCAGCCG
CAACCGATCG AGAACGCGCC GGACGGCACG CTGCCGCTCG CGAAGATCGC CGCGGCGATC
AAGCCGCTCG ACAATCACTT CGCCCGCACG CGCCTGCTCG CGCTCGAAAA CACGATCGGC
GGCCAGGTCC TGCCGGAAGG CTATGTGCAG GAAGCCGTTG CGTTCGCGCG CAGCCGTGGG
CTGGCCACGC ACCTCGACGG CGCGCGCGTG TGCAACGCGG CCGTCGCGTC GGGGCGCCCG
ATCGCCGAGC TGTGCGCGCC GTTCGACACC GTGTCGATCT GCTTCTCGAA AGGGCTCGGT
GCACCGGTGG GCTCGGTGCT GGTCGGCAGC CGTGCGCTGA TCGAGCGCGC GCAGCGCTGG
CGCAAGGTGC TGGGCGGCGG GATGCGGCAG TCGGGCATTC TCGCGGCGGC ATGCCTGTAT
GCGCTCGATC ACAACGTCGA GCGGCTCGCG GACGATCACG CGAACGCCGC GCATCTCGCG
GCCGGCCTCG CGCGCATCGA CGGCGTGAAG GTGCTGTCGC ACGCGACGAA CATGGTGTTC
GCGCAATTCC CCGAAGCCGA TTGCGCGCCG CTCGAGGCGT GGCTGAAGGA ACGCGGGATT
CTCACGCAGA TGCTGTACGC GTCGCGCTTC GTCACGCATT GTGACGTGTC GCGCGCGGAC
ATCGACACGT TCCTCGGCGA GGTCGGCGAG TATTTCTCGC AGCGTCGCGC GTGA
 
Protein sequence
MIDLRSDTVT RPGQAMLAAM TAAETGDDVW GDDPTVLRLQ AVTAERAGKE AGLFFPSGTQ 
SNLAALMSHC ERGDEYIVGQ LAHTYKYEGG GAAVLGSIQP QPIENAPDGT LPLAKIAAAI
KPLDNHFART RLLALENTIG GQVLPEGYVQ EAVAFARSRG LATHLDGARV CNAAVASGRP
IAELCAPFDT VSICFSKGLG APVGSVLVGS RALIERAQRW RKVLGGGMRQ SGILAAACLY
ALDHNVERLA DDHANAAHLA AGLARIDGVK VLSHATNMVF AQFPEADCAP LEAWLKERGI
LTQMLYASRF VTHCDVSRAD IDTFLGEVGE YFSQRRA