Gene Bcen2424_5467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5467 
Symbol 
ID4451337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2565439 
End bp2566077 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID639697528 
ProductDSBA oxidoreductase 
Protein accessionYP_839093 
Protein GI116693560 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0340236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.10941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CGCGCACCGC CAGCTGGTAT TTCGATTTCG TTTCGCCATT CGCCTACCTG 
CAACAGGAGC AGTTCGACCG GTTGCCGCCC GCCGCCGCGT TCGAACCGCG GCCGATCGTG
CTCGGCGCGC TGCTCGCGCA CTGGGGCCAG AAAGCGCCGG CCGAGATCGC GGCCAAGCGC
GTGTTCACCT ATCGGCATGC GCAATACCGC GCGGACAAGC TCGGCATTGC GTTCCGGATG
CCGCCCGCGC ACCCGTTCAA TCCGATCAAG CCGCTGCGCC TCGCGATCGC GATGGGCAGC
TCGCGCGACG CGATCCGGCG GATCTTCCGG CATATCTGGC GCGACGGTCA GGACGTATCG
ACGCCGGAAG GCTTCGCCGC GTTGTGCGAA GCGGTCGGCT TTCCGGAGGG CGTGACGGCC
GTCGAGGCCC AGCCGGTGAA GGACGCGCTG CGCGCGAACA CGGATCGCGC GATCGCCGAG
AACGTATTCG GCGTGCCGAC TTTCGTGCTC GACGGCGACC TGTTCTGGGG CGAGGACGCG
ACCGACATGT TCGTCGACTG CGCGACGTCG CGCGCGTGGC TCGATTCGCC CGAGGTACGC
CGCATCAGTG CCCTGCCGGA AGGAATCCGG CGCGGCTGA
 
Protein sequence
MNAARTASWY FDFVSPFAYL QQEQFDRLPP AAAFEPRPIV LGALLAHWGQ KAPAEIAAKR 
VFTYRHAQYR ADKLGIAFRM PPAHPFNPIK PLRLAIAMGS SRDAIRRIFR HIWRDGQDVS
TPEGFAALCE AVGFPEGVTA VEAQPVKDAL RANTDRAIAE NVFGVPTFVL DGDLFWGEDA
TDMFVDCATS RAWLDSPEVR RISALPEGIR RG