| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5464 |
|---|
| Symbol | |
|---|
| ID | 4453153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2562026 |
|---|
| End bp | 2563318 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639697525 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_839090 |
|---|
| Protein GI | 116693557 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0227388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.134868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC GACAACAGGC TGCCGCGCTG CCGTACGCGG GCGTGCGCGT GATCGAGATG
ACGCACATGG TGATGGGCCC GACGTGCGGG ATGCTGCTCG CGGATCTCGG CGCGGAAGTG
ATCAAGATCG AACCGATCGC GGGCGACAGC ACGCGCGCGC TGCGCGGTTC CGGCGCGGGC
TTCTTCGGGA TGTTCAACCG CAACAAGAAG AGCGTCGCGG TCGACGTGAA GGACCCGCGC
GGGCTCGAGA TCGTGCGGCG GCTCGTTGCG ACGGCGGACG TCTTCAGCGA GAACTTCAAG
AGCGGCACGA TGGACCGGCT CGGGCTCGGT TACCCGCAAC TGGACGCGCT GAATCCGCGC
CTCGTCTACG TGTCGCACAA GGGCTTCCTG CCGGGGCCGT ACGAGCATCG CACCGCGCTC
GACGAGGTCG TGCAGATGAT GGGCGGCCTG GCCTACATGA CGGGCCCCGA AGGGCGGCCG
CTGCGTGCGG GCGCGAGCGT GAACGACATC ATGGGCGGCA TGTTCGGCGC GATCGGCGCG
ATGGCCGCGC TCGCGCAGCG CGAGCGTACG GGCCGCGGCC AGCAGGTGCA GAGTTCGCTG
TTCGAGAACA ACGTGTTCCT CGTCGCGCAG CACATGATGC AGTTCGCGGT GACGGGGCAG
GCCGCGTCGC CGATGCCGAG CCGGATTTCG GCGTGGGCCG TCTACGACGT GTTCTCCGTC
AAGGACGACG AACAGATTTT TCTCGCGGTC GTGTCGGACA CGCAGTGGGT GTTGTTCTGC
GACGCGTTCG GCCTGGCCGC GCTGAAGGAC GATCCGCGGC TCGCGACCAA CAACCTGCGC
GTGCAGGCGC GCGAATGGCT GCTGCCCGAG CTGCGTTCGC GGCTGGCGCC GTACCCGGCC
GCGGAGATCG GCGCGATCTT CGAATCGACC GGCCTGCCGT ATGCGCCGAT CACGAAGCCG
CAGGACCTGT TCGACGATCC GCATCTGCTC GCCACGGGCG GCCTCGAAGC CGTGACGCTG
CCGGCCGACG CGAGCAGCGC CGGGCGGCCG GTCGACACGC GCACCGCGCT GCTGCCGCTG
ACGCTCGCGG GCGAACGCCT GCGGCTGCGC TCGGCGCCGC CCGCGCTCGG CCAGGACACG
TGCGCGCTGC TCGGCGAACT CGGCTACACG CCGGACGACG CGCGTGCGCT GATCGAGGCC
GGCGTCGTCG CGGGGCGGTA CGGCGCGGAC GCCGCCGCGC ACGGCGACGC GCCGGGCGGC
GCGCCGTCGG CGAACGAAGT GGCGAGCGCG TAG
|
|---|
| Protein sequence | MNDRQQAAAL PYAGVRVIEM THMVMGPTCG MLLADLGAEV IKIEPIAGDS TRALRGSGAG
FFGMFNRNKK SVAVDVKDPR GLEIVRRLVA TADVFSENFK SGTMDRLGLG YPQLDALNPR
LVYVSHKGFL PGPYEHRTAL DEVVQMMGGL AYMTGPEGRP LRAGASVNDI MGGMFGAIGA
MAALAQRERT GRGQQVQSSL FENNVFLVAQ HMMQFAVTGQ AASPMPSRIS AWAVYDVFSV
KDDEQIFLAV VSDTQWVLFC DAFGLAALKD DPRLATNNLR VQAREWLLPE LRSRLAPYPA
AEIGAIFEST GLPYAPITKP QDLFDDPHLL ATGGLEAVTL PADASSAGRP VDTRTALLPL
TLAGERLRLR SAPPALGQDT CALLGELGYT PDDARALIEA GVVAGRYGAD AAAHGDAPGG
APSANEVASA
|
|---|
| |