Gene Bcen2424_5462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5462 
Symbol 
ID4453151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2559518 
End bp2560633 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID639697523 
Productamidohydrolase 2 
Protein accessionYP_839088 
Protein GI116693555 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.824926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0519457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTT CGATCAAACG GCGCCGGTTG ATCGGTGCGG CCGCCGCCTC GCTCGCGCTG 
CCCGCGTTCG CCGAGACGCC GGCCCATGAT GGAGCCTCCC GCATGACGCA AAGCAACTAC
CTCGCGGTCC GCCCCGACTG GCTCGCGTCG GCGCTCGAAC CCGCGCTCGA GCCCGACCTG
CCGATCGTCG ACGCGCATCA TCACTTCTAC GAACGGCCGG GCTGGATCTA CATGCTCGAC
GACTATCTGC GGGACGCGCG CTCGGGCCAC AACATCCAGG CGTCCGTCTA CATGCAGGCG
CAGACGCGTT ACCGCGATTC GGGCCCGGCC GAACTGAAGC CGGTGGGCGA GACGGCTTAC
GTCGCCGGCG TGACCGAGCC GCTTCAGCAC GGCCCCGTGG CTGTCGCGAA AGGCATCGTC
GGCCATGCGG ACCTGCGGCT CGGCGAACGC GTGCGCGACG TGCTGGAAGC GCATCTCGAA
GCGGGGCGCG GACGGTTTCG CGGCGTGCGG CACCTGAGTA CGTGGGATGC CGATCCGACG
CTCGCGAATC CGCTGTCGGC GGTGCCGCGC GGGCTGCTGC TCGATCCCGC GTACCGGGCC
GGCGTCGCGC AACTTGCGCC GCTCGGGCTG TCGTACGACG CGTGGCTGTT CTTCCCGCAG
TTGCCCGAAT TATTCGATCT CGCCAAAGCG AACCCGGAGA CGCGGATCAT CGTCAACCAT
TGCGGCGGCG TCGTGCGGAT CGGCAGCTAT GCGGACAAGC GGCCGGAGGT GTTCGAGCGC
TGGTCGGCGT CGATGCGCAC GCTCGCGCAA TTGCCGAACG TGTACGTGAA GGTCGGCGGC
CTCGGGATGC GCATCAACGG GTTCGATTTC GAGAAAGGCG CGAAGCCGCC GTCTTCGGCG
CAACTCGCCG ACGCGTGGAA GCCGTGGATG ATGACCTGCA TCGACGCGTT CGGCCCCGGG
CGCTGCATGT TCGAGAGCAA TTTCCCGGTC GACAAGGGCT CGTATTCGTT CGTGAACGGC
TGGAACGCGT TCAAGCGACT GACCGCGCAG GCCAGCGCGG ACGAGCGCGA CGCGCTGTTC
CGCGGCACGG TCACGCACGC GTACCGGCTC GGCTGA
 
Protein sequence
MTFSIKRRRL IGAAAASLAL PAFAETPAHD GASRMTQSNY LAVRPDWLAS ALEPALEPDL 
PIVDAHHHFY ERPGWIYMLD DYLRDARSGH NIQASVYMQA QTRYRDSGPA ELKPVGETAY
VAGVTEPLQH GPVAVAKGIV GHADLRLGER VRDVLEAHLE AGRGRFRGVR HLSTWDADPT
LANPLSAVPR GLLLDPAYRA GVAQLAPLGL SYDAWLFFPQ LPELFDLAKA NPETRIIVNH
CGGVVRIGSY ADKRPEVFER WSASMRTLAQ LPNVYVKVGG LGMRINGFDF EKGAKPPSSA
QLADAWKPWM MTCIDAFGPG RCMFESNFPV DKGSYSFVNG WNAFKRLTAQ ASADERDALF
RGTVTHAYRL G