Gene Bcen2424_5456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5456 
Symbol 
ID4453145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2556116 
End bp2556703 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content70% 
IMG OID639697517 
ProductTetR family transcriptional regulator 
Protein accessionYP_839082 
Protein GI116693549 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.31437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCT CGAGACAACA GGCGGCGGAA AACCGCCACG CGATCGTCGC GGCCGCCGAG 
CGGCTGTTCC GGCTGCGCGG CGTCGACGCC GTCGGGCTGA CGGAATTGAT GAAGGAAGCC
GGCTTCACGC AGGGCGGCTT CTACAACCAT TTCAAGTCGA AGGACGCGCT GGTCGCCGAA
GTGATGGACA AGGCGATGCA GGATCGCGCG GATTCGCCGA ACGCCGGCAG CGTCGCGAAA
CAGGTAACGG CGTACCTGTC GGGCGCGCAT CGCGACAACG TCGAGGGCGG CTGCCCGCTG
TCGGGCTTCG CGGGCGATGC GCCGCGGCTG ATCGACGCGG CGCGCGCCTG CTACACGCGC
GGCGTCGCCG CGTATCTCGA GCGACTGGAA CGCATGGTGG CCACGGAAGG CTCGGCCGCG
GCCGACGCGC GCGACGACGC GATCGCCGTT CTCAGCCAGA TGGTCGGCGC GCTCGTGCTG
TCACGCGCTG TCGCCGGCAC CGATCCCGCG TTGGCCGACG AGATTCTCGA TGCGGCGCGC
CGCACGCTCG TCGGGCAGCC GGACGATCCA GCCGCCGTGC CGGCATAG
 
Protein sequence
MGVSRQQAAE NRHAIVAAAE RLFRLRGVDA VGLTELMKEA GFTQGGFYNH FKSKDALVAE 
VMDKAMQDRA DSPNAGSVAK QVTAYLSGAH RDNVEGGCPL SGFAGDAPRL IDAARACYTR
GVAAYLERLE RMVATEGSAA ADARDDAIAV LSQMVGALVL SRAVAGTDPA LADEILDAAR
RTLVGQPDDP AAVPA