Gene Bcen2424_5446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5446 
Symbol 
ID4451483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2545896 
End bp2546315 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content70% 
IMG OID639697507 
Producthistidine triad (HIT) protein 
Protein accessionYP_839072 
Protein GI116693539 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.311796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ACAACAACAA CCCGTTCGCC CGAATCCTGC GCGGCGAACT GCCGTGCGTG 
AAGGTCGCCG AAGACGACGC GACGCTCGCG ATCATGGATC TGATGCCGCA GGCCGACGGT
CACGTGCTCG TGATCCCGAA GGAGCCGGCC GCGCAGATCT TCGAGCTGTC CGGCGACGCG
GCCGCGGCCG GTATCCGCAT GACGCAGCGC GTCGCGGCGG CGGTGCGCGC GGCGCTCGAG
CCGGACGGCG TGTTCATCGG CCAGTTCAAC GGCGCGGCAG CCGGCCAGAC CGTCCCGCAC
GTGCATTTCC ACGTGATTCC GCGCTGGGAA GGCGCCGAGC TGCGGATGCA TGCGCGCGAC
GTCGCCGACG CGGCGACGCT CGAAGCGCTC GCGCAGCGCA TTCGTGCCCG CTTCGTGTAA
 
Protein sequence
MSYDNNNPFA RILRGELPCV KVAEDDATLA IMDLMPQADG HVLVIPKEPA AQIFELSGDA 
AAAGIRMTQR VAAAVRAALE PDGVFIGQFN GAAAGQTVPH VHFHVIPRWE GAELRMHARD
VADAATLEAL AQRIRARFV