| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5427 |
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| Symbol | |
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| ID | 4451464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2526195 |
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| End bp | 2527352 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639697488 |
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| Product | porin |
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| Protein accession | YP_839053 |
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| Protein GI | 116693520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.914056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.467276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAGA AACTGTTGAC CATCGCCGCC CTGGCAGCAA CGGCCGGCAC GGCGCACGCA
CAAAGCAGCG TGACCCTGTA CGGCGTCATC GATGCCGGTA TCAGCTACGT GAACCACAGC
AAGACCGCCA ACGGCGGCAC GGGCAAGCTG TTCAAGTACG ACGACGGCGT GGCCCAGGGC
AGCCGTTGGG GCCTGCGCGG CACCGAAGAC CTCGGCGGCG GCCTGAAGGC GATCTTCGTG
CTCGAAAACG GCTTCAACAG CGGCAACGGC ACGATCGGCC AGGGTGGCGC GATCTTCGGT
CGCCAGGCCT ACGTCGGCCT GAGCCAGTCG CAATACGGCA CGGTCACGTT CGGCCGCCAG
TACTCGTTCT CGACCGACAT CCTCGGTTCG AACTACTCGA CGGGCGGCAA CACGGTCGCG
GGTAACTACG CGTACCACGT GAACGACATC GACCAGCTCA CGTCGAGCCG CATCAACAAC
GCCGTGAAGT TCCAGAGCGC GAACTACTCG GGCTTCACGT TCGGCGCGTT GTACGGCTTC
TCGAACTCGA CCGACTTCGC AGGCGCACCG GCCACGACGA CGGGCACGAC GACGACCGCG
GGCTCGTCGC GCGCATACAG CTTCGGCCTG AACTACGCGA ACGGCCCGGT CTCGGTCGGC
GCGGCGTACA CGGACATCCG TTACCCGAGC CAGTCGACGC CCGGCTTCTC GACGACGATC
GCGAACCTGA GCACCGGCAA CGTCCGCGAC CTGCGCACGT ACGGCGTGGG TGGCCGCTAC
GTCTGGGGCC CGGCAACGGC ATGGCTGCTG TGGACGCGTA CGCAGTTCTC GACCGTGTCG
GGCGCGGGCG GCACGTTCTA CAACGCGTAT GAAGCAGGCG CGAAGTACGC CTTCACGCCG
GCACTGTCGG GCGGCCTCGG CTACACGTAC ACGAACGCGA CGCAGAACGG CAACTCGTGG
CACTGGAACC AGGTCAACGG TATCGCCGAC TACGCACTCA GCAAGCGTAC GGACGTGTAC
GGTCTGGTCG TGTACCAGCA GGCTTCGGGC AAGGGCGTGC AAGCGCAGAT CGGTTCGAGC
ACGAGCTACT TCAATACGTC GGGTACGGGT TCGAAGAACC AGATCGCCGC ACGTATCGGT
ATCCGCCACA AGTTCTAA
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| Protein sequence | MNKKLLTIAA LAATAGTAHA QSSVTLYGVI DAGISYVNHS KTANGGTGKL FKYDDGVAQG
SRWGLRGTED LGGGLKAIFV LENGFNSGNG TIGQGGAIFG RQAYVGLSQS QYGTVTFGRQ
YSFSTDILGS NYSTGGNTVA GNYAYHVNDI DQLTSSRINN AVKFQSANYS GFTFGALYGF
SNSTDFAGAP ATTTGTTTTA GSSRAYSFGL NYANGPVSVG AAYTDIRYPS QSTPGFSTTI
ANLSTGNVRD LRTYGVGGRY VWGPATAWLL WTRTQFSTVS GAGGTFYNAY EAGAKYAFTP
ALSGGLGYTY TNATQNGNSW HWNQVNGIAD YALSKRTDVY GLVVYQQASG KGVQAQIGSS
TSYFNTSGTG SKNQIAARIG IRHKF
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