Gene Bcen2424_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5396 
Symbol 
ID4451433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2496015 
End bp2496956 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content64% 
IMG OID639697457 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_839022 
Protein GI116693489 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.003099 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTTTATC TGACGAGTCC CGACGTACGC GAAGCCGAAG TATTCACGCG CATGCCGGAG 
AAGTTTCGCA AGCCGGACGT CCGCACGGAA TGGGCGCGCG CGAATCGCGG CGGCATGGTC
ACCGATTCCT TTCTCGAAGG GCCGGTCTGG GACCCGGACG GCTATCTGTT CGTCACCGAC
ATTCCGCACG GGCGCATCTT CCGCATTTCG CCGTCGGGCG ACTGGGATCT CGTCGTCGAA
TACGACGGCG AGCCCAACGG GATGAAGCGC TTCGACGCAT CGCACCTGAT CATCACCGAC
TACCGGAACG GCCTGATGCT GCTCGATATC GAGCGCGGTG AAATTCGCCC GCATCTCGAG
CGCCGCAACA CCGAGCGCTT CAAGGGCGTG AACGACCTGA CGTTCGACTC GGCCGGCAAC
CTCTATTTCA CCGACCAGGG GCAGACCGGG CTGCACGATC CGACGGGCCG CGTGTATCGG
CTGTCGCCCG ACGGCAAGCT CGACATGCTG CTCGGCACCT GCCCGAGCCC GAACGGGCTC
GTCCTGTCGC GCGACGAGAA GGTGCTGTTC GTCGCGATGA CGCGCGGCAA TGCCGTGTGG
CGCATGCCGT TGCAGGCCGA CGGGTCGGTC AGCAAGGTCA GCCAGTTCTT TACCTCCTAC
GGACCGAGCG GGCCCGACGG CCTCACCGTC GATCTCGAAG GCCGCCTGTT CGTCGCGAAT
CCGGGGCTCG GCCGCGTGTG GGTGCTCAAC CATTGCGCGG AGCCCGTCGA GATCCTGACC
GGACCGAAAG GGGCGTCGCT CACGAGCGTG TGCTTCGGCG GCCCGGACAT GAAGACGCTT
TTCATCACCG AATCGACGTC CGGTTCCGTC CTGAAAGCGG ACATGAGTAT TGCCGGCCCG
CTGCCGAAAC AGGCAGCGAA ACGGGCAGTG AAGCAGGACT GA
 
Protein sequence
MFYLTSPDVR EAEVFTRMPE KFRKPDVRTE WARANRGGMV TDSFLEGPVW DPDGYLFVTD 
IPHGRIFRIS PSGDWDLVVE YDGEPNGMKR FDASHLIITD YRNGLMLLDI ERGEIRPHLE
RRNTERFKGV NDLTFDSAGN LYFTDQGQTG LHDPTGRVYR LSPDGKLDML LGTCPSPNGL
VLSRDEKVLF VAMTRGNAVW RMPLQADGSV SKVSQFFTSY GPSGPDGLTV DLEGRLFVAN
PGLGRVWVLN HCAEPVEILT GPKGASLTSV CFGGPDMKTL FITESTSGSV LKADMSIAGP
LPKQAAKRAV KQD