| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5390 |
|---|
| Symbol | |
|---|
| ID | 4451427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2488445 |
|---|
| End bp | 2489767 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639697451 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_839016 |
|---|
| Protein GI | 116693483 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0803951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG GTTTCATGGA AGCGTCCGCG ATCGAGCGCC GGACCATACG AAAGATCGTC
TGGCGACTCG TTCCCTTCTT GATGATCTGC TACCTGCTTG CCTTCATCGA CCGGGGCAAC
GTGGGGATGG CGTCGCTGCA GATGAACCAC GACCTCGGGA TGTCGGCGCA GGTCTTCGGT
TTCGGCAGCA GCCTGTTCTT CATTTCATAC TTCTTTTTCG AAGTGCCGAG CAATCTCGCG
CTGCAGAAAT ACGGCGCCCG GATCTGGATC GCGCGGATCA TGATCACGTG GGGCATCGTG
TCGGCGGCGA CCGCGCTCGT GCACAACGCG ACGACGTTCT ACGTGCTGCG TTTCCTGCTG
GGCGCGGCCG AGGCCGGCTT CTTCCCGGGC GTGCTGCTGT ATTTGTCGTA CTGGATTCCC
GCGCAGTACC GGGCGCGGAT TGTCGCGACG TTCATGGTCG CGATTCCGGC CGCGAGCTTC
ATCGGCTCGC CGATCTCCGC GCTGCTGTTG CAGATGGACG GTGTCTGGGG CCTGCGCGGC
TGGCAGTGGC TGTTCATCCT CGAAGGCATT CCCACCGTGC TGCTCGGCAT CGCGTGCCTG
TTCATGCTGA CGAACAAGCC GGAGAACGCG AGGTGGCTCG ACGACGACGA GCGCGCGTGG
CTCTCGAACG CGCTGGCCGC CGGCCACAAG ACACGCAAGA AGGTGCCGTC GCTGCCGCTT
GCGCAGCTGT TCCGCAACCG CTACGTGCTG TGCCTCGCGC TCGTCGACAC GTGTGCTTCC
GCGGCAGGCA GCACGCTGTC CGTGTGGCAG CCGCAGTTGC TGAAGTCGTT CGGCTTGACC
GTCATGGAAA CCGGCCTGCT GAACTCGGTG CCGTACGCGG TGGCCTCGAT CCTGATGGTC
TACTGGGGCC GGCGCTCGGA CCGCCTTGGC GAACGCCGCT GGCACACGGT CGTGCCGATG
CTGCTGATCG GCGTGGGGCT GTTCGCGACG TCGCTGAGCG GATCGCTGCT GCCCACGATC
TGCATGCTCT GCGCGGTGCT GGTCGGCGCA TATTCGTTCA AGGGCCCGTT CTGGGCGCTC
GCGACCGACA TGCTGTCCAA CAGCACCGTG GCCGCCGGGC TCGCGACGGT CAACGCGATC
GCGAACCTGC TCGGCGGCGG GCTGATGGTG AACGTGTACG GGTGGGTGAA GGCGGCGACG
GGCAGCTACG CGCTCGCCTT GATGCCGCTC GCGATCCTCA CGCTCGTCAG CGTCGCGACG
CTGCTGCTGC TCACGCGCAA TCATGCGGCC GGCAAGCTGG TCGGCAAGAC GGGGACCATC
TGA
|
|---|
| Protein sequence | MQAGFMEASA IERRTIRKIV WRLVPFLMIC YLLAFIDRGN VGMASLQMNH DLGMSAQVFG
FGSSLFFISY FFFEVPSNLA LQKYGARIWI ARIMITWGIV SAATALVHNA TTFYVLRFLL
GAAEAGFFPG VLLYLSYWIP AQYRARIVAT FMVAIPAASF IGSPISALLL QMDGVWGLRG
WQWLFILEGI PTVLLGIACL FMLTNKPENA RWLDDDERAW LSNALAAGHK TRKKVPSLPL
AQLFRNRYVL CLALVDTCAS AAGSTLSVWQ PQLLKSFGLT VMETGLLNSV PYAVASILMV
YWGRRSDRLG ERRWHTVVPM LLIGVGLFAT SLSGSLLPTI CMLCAVLVGA YSFKGPFWAL
ATDMLSNSTV AAGLATVNAI ANLLGGGLMV NVYGWVKAAT GSYALALMPL AILTLVSVAT
LLLLTRNHAA GKLVGKTGTI
|
|---|
| |