| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5341 |
|---|
| Symbol | |
|---|
| ID | 4453808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2431185 |
|---|
| End bp | 2433089 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639697402 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_838967 |
|---|
| Protein GI | 116693434 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.556905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCGA ACGTGCAGAA GAGCTTCAAG GGAATCCCGT GGTGGGGCTG GGCCTCGGCC
GCGGTGCTGT ATGTCGGCGT GGCCGGCGCG GCCGTCGATT TCGCGTGGGA ACGCGCGATC
GACGCGCTCG AGGAGGCCGG CGCGCACCGG CTCGACCTGT ATGCGTCGAG CCTGAAAAGC
GAGCTCGGCC GCTTCGAGAT CCTGCCCGGC CTCGTCGCGC GGCAGGACGG CGTGCGCGCG
ATGCTGAAAG CCGCGCCGAA CGATGCGCCC GAGCTCGTGC ATGCGGTGAA CACCTACCTC
GAAGCCGTGA ACCGCGACGC GGGCAGCGGC GCGGTCGACG TGATCGATCT GCAAGGCGAC
GTGATCGCCG CGAGCAACTG GAACGAGACG ATCAGCTTCG TCGGCACCAA CGTGTCGTAC
CGGCCGTACT TCAAGGACGC GCTCGCGCGC GGCAGCGGCC GCTTCTTCGG CATCGGCACC
AACACCGGCG TGCCCGGCGT CTACTTCGCG AGCGCGGTGC GCAGCGACGG CGTGCCGATC
GGCGTGGCCG CCGTGAAGAT CAGCGTCGAC CCGCTCGAAT CGGCATGGCG CGCGCCGGGC
GTCGCCGCGC TGGTCGTCGA CAGCAACGGC GTGGTCGTGA TCTCGACCGA ACCCGCATGG
AAATTCACCG CGCTGCGCCC GATCACCGCG CAGCAACAGC GCGACATCCA GGCGTCGCGC
CAGTACGCGG GCCGCACCGT CGACGCGCTG CCCTACCGCC ACATCGGCGA CCGCAGCTCG
GCCGCGTGGT TCGGCACCTT CCCCGATCCG CGCCACGCCG GCCGCACCAC GCGCTATCTC
GTGATGTCGC GCCCCGCGCC GCAAGCCGGC GATTCGCTGA TGGTGCTGCT CGACATTGCG
GGCGCGCGGC GCCAGCAGCA GACGGCGTTC GTGTTCGTCA CCGGCGCGTT CCTGATCGCC
GCGCTGCTGG CCGGCTATGC GATCCAGCGC CGCCGGGCGA TCCTCGCGCG GCTGAGCGCG
CAGGACGCGC TGCGCCGCGC GAACGACCGG CTCGAACTGA CCGTCGCGCA GCGCACGGCC
GCGCTGACGG CCGCGAACGA GCGGATGCAG CGCGAGATCG ACGAACGCGA ACGCACCGAG
CAGCGGCTGC GCGCGTCGCA GCAGGAAGTC GTGCACGCAG GCAAGCTCGC GGTGCTCGGG
CAGATGGCCG CCGGCCTCAC GCACGAACTG AACCAGCCGC TCGTCGCGAT CCGCACGCTG
TGCGACAACG CGCGCACCTT CTTCGAGCGC GGCCAGCCGG CGCCGGCGCT CGCGAACCTC
GAACGAGTCG GCAAGCTGGT CGACGGCATG GCCGTGCTCA CCGGCGAGTT GAAGACCTTC
GCGCGCAAGC CCGACGTCGA GCGCGTCGCG GTGTCGCTGA ACGAGGCCGT CGCGCATGCG
CGGCTGATCT ACGATGCGCG GATTCGCGAC GAAGGCGTGC GGCTCGACGT GAACATCGCA
CCCGGCACGA CGGTCTCGGC CGAATCGAGC CAGTTGCAGC AGGTGATCGT GAACCTGCTC
GGCAACGCGC TCGACGCGGT GCACGACGCA CCGGTGCGCC GTATCGTCAT CGAGGCGGCC
GAAACCGGCG ATGCGGACGA TGCGACCAAC GCCGGCCGCG TGCGCCTGGC GGTGGCCGAC
AGCGGCGCCG GCATCGCGCC CGACGTGCTG CCGCACCTGT TCGAGCCGTT CGTGACCACC
AAGCCGCGCG GCCAGGGCCT CGGGCTCGGG CTCGCGATCA CGTCGCGCAT CGTCGAGGCG
TTCGGCGCGA GGATCACCGC GACGAACCGC GACGAAGGCG GCGCGCAGTT CACCATCGAA
TTCGCGGCGG CAACGCCGCA ACAGAGGACA GAGCATGGAA GATGA
|
|---|
| Protein sequence | MRANVQKSFK GIPWWGWASA AVLYVGVAGA AVDFAWERAI DALEEAGAHR LDLYASSLKS
ELGRFEILPG LVARQDGVRA MLKAAPNDAP ELVHAVNTYL EAVNRDAGSG AVDVIDLQGD
VIAASNWNET ISFVGTNVSY RPYFKDALAR GSGRFFGIGT NTGVPGVYFA SAVRSDGVPI
GVAAVKISVD PLESAWRAPG VAALVVDSNG VVVISTEPAW KFTALRPITA QQQRDIQASR
QYAGRTVDAL PYRHIGDRSS AAWFGTFPDP RHAGRTTRYL VMSRPAPQAG DSLMVLLDIA
GARRQQQTAF VFVTGAFLIA ALLAGYAIQR RRAILARLSA QDALRRANDR LELTVAQRTA
ALTAANERMQ REIDERERTE QRLRASQQEV VHAGKLAVLG QMAAGLTHEL NQPLVAIRTL
CDNARTFFER GQPAPALANL ERVGKLVDGM AVLTGELKTF ARKPDVERVA VSLNEAVAHA
RLIYDARIRD EGVRLDVNIA PGTTVSAESS QLQQVIVNLL GNALDAVHDA PVRRIVIEAA
ETGDADDATN AGRVRLAVAD SGAGIAPDVL PHLFEPFVTT KPRGQGLGLG LAITSRIVEA
FGARITATNR DEGGAQFTIE FAAATPQQRT EHGR
|
|---|
| |