Gene Bcen2424_5322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5322 
Symbol 
ID4453719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2411853 
End bp2413247 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content68% 
IMG OID639697383 
Productd-galactonate transporter 
Protein accessionYP_838948 
Protein GI116693415 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAATC AGACCTCCCC TCGCGATCTT CCGCTCGACC TGGCGCGCAC CGCGCGCCGA 
ACCGCCGTGC GCTACTGGAT CCTGGCGATG CTGTTCGTCG TCACGACGCT CAACTATGCG
GACCGCGCCA CGCTGTCGAT CACCGGCACG CCGATCCGCA AGGCGTTCGG TATCGACCCG
GTGACGATGG GTTACATCTT CTCGGCGTTC AGCTGGGCGT ACGTGCTCGC GCAACTGCCG
AGCGGCTGGC TGCTCGACCG CTTCGGCGCG CGGCGCGTGT ATGCGGCGAG CATCTTCCTG
TGGTCGGCGT TCACGCTGCT GCAGAGCACG ATCGGCCTCG GCGGCAGCGC CGCGTTCGCG
GTCGCCGCGC TGTTCGCGAT GCGCTTCGCG GTCGGCATCG CGGAGGCGCC GGCGTTTCCG
GCGAACGCGA AGGTCGTCGC GAGCTGGTTC CCGACCGCCG AGCGCGGCAC CGCGTCGGCG
ATCTTCAACG CCGCGCAGTA CTTCGCGGCC GTGGTGTTCT CGCCGCTGAT GGCCTGGCTC
ACGCACGCGT ACGGCTGGCA TCAGGTGTAC CTGTGGCTCG GCCTGGCCGG CATCGCGCTC
GCGTTCCTGT GGCTGCGCGT CGTGAAGGAC CCGGCCGACC ATCCGGCCGT GAACCGCGCG
GAGCTCGACC ATATCGAGCA GGGTGGCGGC CTCGTGCGGT CGACGGGCGG GGCGACCGGC
GCGCGCGGTA GCGGCGGTGG CGCTTCCGAA GGCAGCCGCG TGGCGGGCTG GTACTACGTG
CGCCAGTTGC TGTCGAACCG CATGCTGATC GGCGTGTACC TCGGCCAGTA CTGCGTGAAC
GTGCTCACGT ACTTCTTCCT CACGTGGTTT CCGATCTACC TCGTGCAGGC GCGCGGAATG
TCGCTGCTGA AGGCCGGCTT CATGACGTCG CTGCCGGCGA TCTGCGGATT CCTCGGCGGC
GTGCTCGGCG GGATGCTGTC GGACGCGCTG ATCCGCCGCG GCGTCTCGCT GACGCTCGCA
CGCAAGATCC CGATCGTCGG CGGGATGCTG CTGTCGATGG TCATCATCGG TTGCAACTAC
GTCGACAGCG AAGCGCTGGT CATCATGCTG ATGGCCGTGT CGTTCTTCGG CAAGGGGATC
GGCTCGCTCG GCTGGGCCGT CGTCGCGGAT ACCGCGCCGA AGGAAGCGAT CGGCCTGTCG
GGCAGCCTGT TCAACATGTT CGGCAACACG GCGGGCATCG TCGCGCCGAT CGCGATCGGC
TACCTCGTCG GCGCGAGCGG CTCGTTCAAC GGCGCGCTGG TGTTCGTCGG GCTGAACGCG
CTCGTCACCG TGTTCAGCTA TCTCGTGATC GTGAAGGACA TCAAGCGCGT CGAGCTGCGT
CATCGCGACG CGTGA
 
Protein sequence
MSNQTSPRDL PLDLARTARR TAVRYWILAM LFVVTTLNYA DRATLSITGT PIRKAFGIDP 
VTMGYIFSAF SWAYVLAQLP SGWLLDRFGA RRVYAASIFL WSAFTLLQST IGLGGSAAFA
VAALFAMRFA VGIAEAPAFP ANAKVVASWF PTAERGTASA IFNAAQYFAA VVFSPLMAWL
THAYGWHQVY LWLGLAGIAL AFLWLRVVKD PADHPAVNRA ELDHIEQGGG LVRSTGGATG
ARGSGGGASE GSRVAGWYYV RQLLSNRMLI GVYLGQYCVN VLTYFFLTWF PIYLVQARGM
SLLKAGFMTS LPAICGFLGG VLGGMLSDAL IRRGVSLTLA RKIPIVGGML LSMVIIGCNY
VDSEALVIML MAVSFFGKGI GSLGWAVVAD TAPKEAIGLS GSLFNMFGNT AGIVAPIAIG
YLVGASGSFN GALVFVGLNA LVTVFSYLVI VKDIKRVELR HRDA