Gene Bcen2424_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5312 
Symbol 
ID4453322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2401410 
End bp2401931 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID639697373 
ProductRbsD or FucU transport 
Protein accessionYP_838938 
Protein GI116693405 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.471527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCACG GCCGCCGGGA TCGGGTAACG TTATGCGATT CGTTCCTGAT CCCGGAGACA 
ACCGACATGC TGAAGAATCT CGACCCGCTG CTGCACGCCG ACATCCTGCA CACGCTGCGC
GCGATGGGCC ACGGTGACGA AATCGCGATC TGCGATGCGA ATTTCCCGGC CGAATCCGTC
GCGGAGCACA CGGTGGTCGG GCGCGCGTTG CGGGTCGACG GCGCCGATTC GGCGCGCGTG
GTGCGCGCGG TGCTGTCGGT GCTGCCGCTC GATACGTTCG TCGACACGCC CGCGTGGCGG
ATGGAAGTCG TCGGCGACGC GGCCGCGGTG CCGCCCGTGC AGCGCGAAGT GCAGGCCGAG
ATCGACCGCG CGGAAGGGCG TGCGGTGCCG CTGACCGGCG TCGAACGTTT CGCGTTCTAC
GAGCGTGCGC AGCAGGCGTA TGCGGTGATC GTCACCGGCG AAACGCGCGG CTACGGCTGC
TTCATCTTCA AGAAAGGCGT GCTGTTGAGC GACGCGGGCT AA
 
Protein sequence
MHHGRRDRVT LCDSFLIPET TDMLKNLDPL LHADILHTLR AMGHGDEIAI CDANFPAESV 
AEHTVVGRAL RVDGADSARV VRAVLSVLPL DTFVDTPAWR MEVVGDAAAV PPVQREVQAE
IDRAEGRAVP LTGVERFAFY ERAQQAYAVI VTGETRGYGC FIFKKGVLLS DAG