Gene Bcen2424_5284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5284 
Symbol 
ID4453604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2363649 
End bp2364713 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID639697340 
Productputative agmatinase 
Protein accessionYP_838910 
Protein GI116693377 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.190576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACGT CGATATCTTC GCATTCTTCT TTCCCGGCGG AGCGCGTAAA ACTGTGCGCC 
AGGCCGCGTC GCATGATACG GCAACCCCAC ATCGGAAGAG ACGACCCCAT GAACGACCAC
ACCCATTTCC AGCCGCTCGG CGGCAATGAA ATGCCGCGCT GCGGCGGCAT CGCGACGATG
ATGCGCCTGC CGCACGTGTC GAGCGCCGAA GGCCTCGACG CGTGTTTCGT CGGCGTGCCG
TTCGATCTCG GCACCTCCAA CCGCACCGGC GCGCGCTTCG GCCCGCGCCA GATCCGTACC
GAATCCGTGC TGCTGCGCCC GTACAACATG GCCACGCGCG CAGCACCCTT CGATTCGCTG
CAGATCGCCG ACATCGGCGA CGTCGCGATC AATCCGTACA ACCTGCACGA TTCGATCGCC
CGCATCGAGG CCGCGTACGA CGCGATTCTC GAGCACGACT GCAAGCCGAT CACGCTCGGC
GGCGACCATA CGATCGCGCT GCCGATCCTG CGCGCGATCC ACCGCAAGCA CGGCAAGGTT
GCATTGATCC ACGTCGATGC ACACGCCGAC GTGAACGACA CGATGATGGG CGAAAAGATC
GCGCACGGCA CGCCGTTCCG CCGCGCGGTC GAGGAAGGGC TGCTGCACGG CGACAAGGTC
ACGCAGATCG GCCTGCGCGG CACCGGCTAC GCGGCCGAGG ATTTCGACTG GTGCCGCGAG
CAGGGCTTCC GCGTGGTCCA GGCCGAGGAA TGCTGGAACA AGTCGCTCGC GCCGCTGATG
GAAGAAGTGC GCGCTCGCAT CGGCGACACG CCCGTCTACA TCACGTTCGA CATCGACGGC
ATCGATCCGG CCTATGCGCC GGGCACCGGC ACGCCGGAAA TCGCGGGCCT CACGGTGCCG
CAGGCGCTCG AGATCATCCG CGGCGCGATG GGGCTGAACA TCGTCGGCTG CGATCTCGTC
GAAGTCGCGC CGCCGTACGA CCCGTTCGGC ACCACGGCGC TGCTCGGCGC GAACCTCGCG
TACGAGCTGC TGTGCGTGCT GCCGGGCGTC GCGTACCGCG ACTGA
 
Protein sequence
MFTSISSHSS FPAERVKLCA RPRRMIRQPH IGRDDPMNDH THFQPLGGNE MPRCGGIATM 
MRLPHVSSAE GLDACFVGVP FDLGTSNRTG ARFGPRQIRT ESVLLRPYNM ATRAAPFDSL
QIADIGDVAI NPYNLHDSIA RIEAAYDAIL EHDCKPITLG GDHTIALPIL RAIHRKHGKV
ALIHVDAHAD VNDTMMGEKI AHGTPFRRAV EEGLLHGDKV TQIGLRGTGY AAEDFDWCRE
QGFRVVQAEE CWNKSLAPLM EEVRARIGDT PVYITFDIDG IDPAYAPGTG TPEIAGLTVP
QALEIIRGAM GLNIVGCDLV EVAPPYDPFG TTALLGANLA YELLCVLPGV AYRD