Gene Bcen2424_5250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5250 
Symbol 
ID4453218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2322257 
End bp2322889 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID639697306 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_838876 
Protein GI116693343 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAA CGACCCTGCT GATCTTCGCC GCCGTCGCGT TCGTCGGCAT CGCGACACCT 
GGCCCGACCG TGCTGCTCGC GCTGACCAAC GGCTCGCGCT ACGGCGTGCG CCGCGCGGCG
TTCGGTTTCG CGGGCGCGAT GCTGTCCGAC TTCGTGCTGA TCGTCGCGGT CGCGCTCGGC
CTCGGCGCGC TGCTGATGGC GTCGGCGTTC TGGTTCTCGG TCGTGAAGTG GCTCGGCGCC
GCGTACCTCG CGTATGTCGG CATCCGGCTG CTGACGTCGA AAGGGGCGCT CGACGTCGTG
GTCGCGCAGC GCGGCACGGC CTCCGGACGC AACGCATCGA TCTTCGCGAA AAGCTTCCTG
ACCGCGGTGA CGAACCCGAA GGGCTATCTG TTCTTCTCCG CGTTCCTGCC GCAGTTCCTC
GATCCGCTGG CGCCGCTCGC GCCGCAGTAC GTCGTGCTCG CGGTCACGTT CGCGCTGCTC
GACGGCGCGG TGATGTTCGG CTACGCGCTG CTCGGCGCAC GCGCGGTGCG GCTGCTGAAG
CGCTCGGGCG CGCTGTGGCT CGAACGCACG TGCGGCGCGA TGCTGCTCGC GCTCGCCGGT
TCGCTGGCGC TGTACCGGCG CCATGCCGCG TAG
 
Protein sequence
MHETTLLIFA AVAFVGIATP GPTVLLALTN GSRYGVRRAA FGFAGAMLSD FVLIVAVALG 
LGALLMASAF WFSVVKWLGA AYLAYVGIRL LTSKGALDVV VAQRGTASGR NASIFAKSFL
TAVTNPKGYL FFSAFLPQFL DPLAPLAPQY VVLAVTFALL DGAVMFGYAL LGARAVRLLK
RSGALWLERT CGAMLLALAG SLALYRRHAA