Gene Bcen2424_5224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5224 
Symbol 
ID4453192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2289648 
End bp2290313 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID639697280 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_838850 
Protein GI116693317 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0179146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.128612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAAC TCGCTCTTGC GCTCGCGCTT TCCGCAACGG CCCTCGCCGC GTGCTCGACC 
GCATCCGGCC CGACCTTCAG CGCCTCCGAA CTGCAGCCGC GCGACGGCGT GCGCACCTTC
CAGGTGGACT GCCACGGCCT GCTGTCCGGC CCGCAGACCT GCATGAAGGC CGCCCGCAAG
ATCTGCGGCG ACGAGCCCGT GCGCGCCGTC GACTCGGCCC GCGCGCTGCG CGACAAATCC
GATCCGGCCA CGCTGGTCTT CCAGTGCGGC GCCGCACCGG CCGAAGCGGC TTCGGCCGCC
ACACCCGCAC CCGCCGCCGT GATCGAACGC GTGAACCTGT CCGGCGACGC ACTGTTCGCC
ACCGACCACG CGACGCTCGC ACCGACCGCG CGCGAATCGC TGGACCGGCT GCTGAGCGAG
CGCGCCGACC GCACGTATTC GCAAGTGACG GTCACCGGCT TCACCGACTC GGTGGGCAGC
GACGACTACA ACCTCGCGCT GTCGAAGCGC CGCGCCGAAT CGGTCGCCGC CTATCTGAAG
GCGCACGGGC TGAAGACCGA CTCGATCACC GTGTCGGGCC GCGGCAAGGC CGATCCGGTC
GCGTCCAACG CGACGCCGGA AGGCCGCGCC AGCAACCGCC GCGTCGAAAT CCGGCTGCAG
CACTGA
 
Protein sequence
MNKLALALAL SATALAACST ASGPTFSASE LQPRDGVRTF QVDCHGLLSG PQTCMKAARK 
ICGDEPVRAV DSARALRDKS DPATLVFQCG AAPAEAASAA TPAPAAVIER VNLSGDALFA
TDHATLAPTA RESLDRLLSE RADRTYSQVT VTGFTDSVGS DDYNLALSKR RAESVAAYLK
AHGLKTDSIT VSGRGKADPV ASNATPEGRA SNRRVEIRLQ H