Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5206 |
Symbol | |
ID | 4453070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2259849 |
End bp | 2260607 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639697262 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_838832 |
Protein GI | 116693299 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0231345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATGA CGGGCAATAC CATTTTCATC ACGGGCGGCA CTTCCGGCAT TGGTCGCGCG CTGGCCGAGC AGTTTCACGC ACTAGGCAAC AAGGTCATCA TCGCCGGGCG CCGCAAGGCT CTGCTCGATG AGGTCACGAC AGCCAATCCG GGCATGGAAG GTGTGGCGCT GGACATTTCG GATGCGGCCG ACATCGACCG CGTCGCAGCG CAGTTGATTC GCGACTATCC GTCGCTGAAC GTGTTGATCA ACAATGCCGG GATCATGCCG TTTGATGATC CTTCCGGCCG GATCGATGAT TCCGTCTCCC GCCAAATCCT CGACACGAAT CTGCTGGGTC CGATTCGTCT GACCTCGGCG TTGATCGAGC ACCTCAAGGC GCAGCCTCGC GCGACGATCA TCCACAACAC CTCGGTGTTG GCCTATGTGC CGATCGCGAC CAACGCGGTC TATTCAGCCT CGAAGGCGGC GCTGCATTCG TATGCATTGT CGCAACGCTT CATGCTCAAG GGCACGAGCG TGTCCGTGCA GGAAATCGCG CCTCCGTGGG TCGACACCGA CCTCATCAAG AAGAGTGGCG ACCCGCGCGC CATGCCGCTC GATGCATTCA TCGCAGAAAC GATGAAGGGC CTGGCGACCG AAGAGCCCGA AGTCTTTGTC GAGGCGATTC GCGCGCTGCG CGACAATCCC GGCCTGGGCG AACACGCGCT GATCGATGGC TTCAACGCCG AGATCGCCGC GAACCCTATC CCGGTCTGA
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Protein sequence | MQMTGNTIFI TGGTSGIGRA LAEQFHALGN KVIIAGRRKA LLDEVTTANP GMEGVALDIS DAADIDRVAA QLIRDYPSLN VLINNAGIMP FDDPSGRIDD SVSRQILDTN LLGPIRLTSA LIEHLKAQPR ATIIHNTSVL AYVPIATNAV YSASKAALHS YALSQRFMLK GTSVSVQEIA PPWVDTDLIK KSGDPRAMPL DAFIAETMKG LATEEPEVFV EAIRALRDNP GLGEHALIDG FNAEIAANPI PV
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