Gene Bcen2424_5204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5204 
Symbol 
ID4453068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2257929 
End bp2258468 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID639697260 
Productalkylhydroperoxidase 
Protein accessionYP_838830 
Protein GI116693297 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0555876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC GGATCAATAC GCCTGCCGCT GCTGCGGCCA CTGGCGCGAC CGCCGACGTT 
TTTGCCACCA TCCGCAAGGC GGTGGGCATG GTTCCGAACG CTTATGCGGC CATCGGTGCT
CTGAATACGC CTGCGCTGCA GGCGATTCTT TCCGCCGACG CGGTGCTCTC GAAGGGCTCG
CTGTCCGCAC AGGATTGCGA AACGATCAAA CTCGTGGTCA GCGCCATTTC CGGTTGCGAC
TACTGCGTGG CAGCACATAG CCTGGCCAGC AAGGCATCCG GTATCGCGGT CGATGCCGTG
CGCGCGATTA GGGCCCTGGA GCCCACTGGT GACGCACGTC GCGATGCGCT GATTCGGTTC
ATTCGGGTTC TTCAGGAAAG CCGCGGAACA ATTGCGTCAG AGGAATTGGA GGCTTTCCGG
TCAGCAGGAT ACTCGGACGA GTCCGTCGTT GATGTTGCTC TGGCCATCGC GCTCATCACG
TTCACGAACG TATTCAATCG AGTGAATAAC ACGGTCGTGG ATTTCCCCGC GTTGAAGTAG
 
Protein sequence
MTARINTPAA AAATGATADV FATIRKAVGM VPNAYAAIGA LNTPALQAIL SADAVLSKGS 
LSAQDCETIK LVVSAISGCD YCVAAHSLAS KASGIAVDAV RAIRALEPTG DARRDALIRF
IRVLQESRGT IASEELEAFR SAGYSDESVV DVALAIALIT FTNVFNRVNN TVVDFPALK