Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5196 |
Symbol | |
ID | 4453050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2247386 |
End bp | 2249074 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639697252 |
Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_838822 |
Protein GI | 116693289 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [T] Signal transduction mechanisms |
COG ID | [COG0492] Thioredoxin reductase [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0125456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0027232 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCACGTGC GTTCAAATGA TGATGGTAAG CAAGGCGATA CCAACCCACT GTCCAGCCCG GTTGCGATTG GTGACACCGA TTACCAACGG GAGCGATACC CATTACTCAC CGAAGCGGAA ATACACCGAA TCACGCGATT CGGTGAAATC CGCGAGTGGA ACGACGGCGA TCAGATCTTC CGTGTGGGCG AGCCGGGCTT CGGTATGTTC GTCATCCTTT CGGGCTCGAT TCGCGTCACT CGCCGGGATG CACTGAACCG ACAGATTATT GTCAAAGAGC TGGGGGATCA TCATTTCGTC GCCGAGGTTG GCCAGATATC AGGAGCGAGA TGCCTAGTTG ACGGCGATGC CGCAGGCAAC GTCCGCGCAC TTCAAGTTAC ACCGGCCAGG CTGCGGGCAC TGATGATCGC AGAAGCAGAA CTCGGCGAGC GCATCATGAG AGCCTTGATC CTGCGGCGAG CTGGACTCGT CGAAGGCGGC AGCGGCATCA TCGTCGTCAC GGAATCAAAT TCGCCGATTC TCAATGCACT TCAGAACTTT CTCACACGGA ACAGCATTCC CTACACCGTC GTCGATAGTT CGGATCTGGA GATTGCGCGC TACGTCAATC AATACCCCAC CGATTCCGCA GACTATCCGC TCGTTATCTG CCCGGACGGA AAGGTTCTCT GCGCGCCAAC CGAAACCGAA CTGGCGACAG CGCTCGACCT CATTCCCGAT TTTGATGAAG CCGAAGTGTT CGATGTCGCG ATCGTCGGCT CGGGCCCTGC CGGCCTGGCC ACTGCGGTGT ATGCAGCATC GGAAGGCCTA GCTGCCGTCA TTTTGGATAA CCACGCACCA GGAGGACAGG CAGGCGCGAG CGCGCGCATC GAGAATTTCT TCGGTTTCCC GGCTGGTATA TCAGGGTATG CACTGACCGC ACGCGCATAT ATCCAGGCTC AGAAATTCGG TGCGCGCGTC GCGATCCCGG TGGATGTCGA AGCCCTGGAA TGTGACACGT CTCCATTTCG CCTCCGGCTC GGTAATAACG GCACGGTGCG GGCCCATTCG GTCGTCATAG CTACAGGCGC GGCTTACCGC AAGCCTGCGA TCGAAGGGAT CGAACGTTTT CAGGGGCGAG GCGTGTATTA CTGGGCCTCT CCGGTAGAAG CCAAACTATG CGCGGGGAAA AATGTCGTGC TTGTCGGCGC CGGAAACTCG GCCGGACAGG CCGCCGTCTA TCTGGCATCG CATGCGAAAC ATGTCAGCAT GCTTGTTCGG GGACCGAATC TATCCGACAG CATGTCGCGC TATCTCATCG ATCGCATCGA ATCGATGGAC AACATCGACA TTCACTTCAA TACGCAGATT GCGTCGTTTC GCGGTGAGGA TGAGCTGGAG GAAATCGAGA TTGCCGGCTC CGACGGAAAG CGCACATCGA AGAAAGCGGA GCACGTCTTC CTGTTTATCG GGGCGATACC TAACACCTCG TGGCTTGACG GATGTGGGGT CACCGTCGAC ACATCCGGCT TTGTGCTAAC GGGATCCGAC GTTTCCGCAC AGGCTGGAGA GCATGAAACC AGTGTCCGTG GCGTATTTTG TGCCGGAGAC GTGCGGCATG ATTCCACCAA GCGCGTGGCG GCCGCTGTCG GCGACGGAGC AGCGGTCGTC TCGCAGCTTC ACAAGTTTCT TGCCAGCTTG ACCGCATAA
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Protein sequence | MHVRSNDDGK QGDTNPLSSP VAIGDTDYQR ERYPLLTEAE IHRITRFGEI REWNDGDQIF RVGEPGFGMF VILSGSIRVT RRDALNRQII VKELGDHHFV AEVGQISGAR CLVDGDAAGN VRALQVTPAR LRALMIAEAE LGERIMRALI LRRAGLVEGG SGIIVVTESN SPILNALQNF LTRNSIPYTV VDSSDLEIAR YVNQYPTDSA DYPLVICPDG KVLCAPTETE LATALDLIPD FDEAEVFDVA IVGSGPAGLA TAVYAASEGL AAVILDNHAP GGQAGASARI ENFFGFPAGI SGYALTARAY IQAQKFGARV AIPVDVEALE CDTSPFRLRL GNNGTVRAHS VVIATGAAYR KPAIEGIERF QGRGVYYWAS PVEAKLCAGK NVVLVGAGNS AGQAAVYLAS HAKHVSMLVR GPNLSDSMSR YLIDRIESMD NIDIHFNTQI ASFRGEDELE EIEIAGSDGK RTSKKAEHVF LFIGAIPNTS WLDGCGVTVD TSGFVLTGSD VSAQAGEHET SVRGVFCAGD VRHDSTKRVA AAVGDGAAVV SQLHKFLASL TA
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