| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5142 |
|---|
| Symbol | |
|---|
| ID | 4451166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2190033 |
|---|
| End bp | 2191211 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639697198 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_838768 |
|---|
| Protein GI | 116693235 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.28982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGC GTGCGGCCGC GTCCGCGCGG CGCGTCACGC TCGACAAGGT CGGCATCCTG
ATCGGCATCC TGACGATCGT CGCCGTGTTC GGCCTGTCGT TCGCGGTGCT GCGGCCGAAC
CGGATCGCGG CCGGCACCGG GCTGTCGGTG TTCGCCGCGC TGCCGCCGAT GCAGGGCGCC
GCGCTCGCCG CGCTGTGGAC CGTCGGCGCG CTGTGGGCGA TGACGGCGAG CCGCCCCGCG
TGGCGGCTCG CGGCCGGCTG CGCGGGGCTC GCGACGCTCG CGTATGCGGT CGGCGCGGCT
GCGACGCATG TCGTCGCGCC CGACGACATG CTGGCCCGCG TGTCGCCCGA TGCCGGCGTC
TGGCTGCTGC TGTTCGCGTG GGCCGTGCTG ATCGCCGACG CGCTCGCACG CCTCGCGTTC
GGCCCATGGC GGCGCCTCGC CGCGCTCGCC GTCGCGATAG CAGCAGTTTC CGTGCCGCTC
GCGAGCGGCT GGTGGGACGG CCTCTCCGTG ATGCGCGAAT ACGCGGTGCG CAGCGACGAT
TTCTGGCGCG AGGCGATCCG TCACGTGTCG CTCGCGGGCG GCTCGGTCGC CGCCGCGCTC
GTCGCGGGCG TGCCGCTCGG CATCGCCTGC GCGCGCATCG CAACGGTGCG CACCGTCGCG
ATGCCCGTAC TCAATATCGT GCAGACGATC CCCAGCATCG CGATGTACGG GCTGATGATG
GCGCCGCTCG GCCTGCTCGC CGCGCACGTG CCGCTTGCGG CCGCGCTCGG CATTCGCGGG
ATCGGCGTCG CGCCGGCCGT GCTCGCGCTG TTCCTGTATT CGCTGCTGCC GATCGCATCG
AGCGTCGTGG TCGGGCTCGA ACAGGTGCCG CCGCACGTGA CCGAAGCGGC CCGCGCGATG
GGCATGACGC GCATGCAGCG GCTGCTGCGC GTCGATCTCG TGCTCGCGCT GCCGGTGATC
CTGAGCGGCG TGCGCATCGT GCTCGTGCAG AACATCGGCC TGACCGCGGT GGCCGCGCTG
ATCGGCGGCG GCGGATTCGG CACCTTCATC TTCCAGGGGA TCGGGCAATC GGCCGCCGAT
CTCGTGCTGC TCGGCGCGAT CCCGACGATC GCGCTCGCAC TGGCGTCCGC GGTCGTGTTC
GAAGCCGCGA CGTCGCTCGC GAAAGGGCGT GCAGGATGA
|
|---|
| Protein sequence | MTERAAASAR RVTLDKVGIL IGILTIVAVF GLSFAVLRPN RIAAGTGLSV FAALPPMQGA
ALAALWTVGA LWAMTASRPA WRLAAGCAGL ATLAYAVGAA ATHVVAPDDM LARVSPDAGV
WLLLFAWAVL IADALARLAF GPWRRLAALA VAIAAVSVPL ASGWWDGLSV MREYAVRSDD
FWREAIRHVS LAGGSVAAAL VAGVPLGIAC ARIATVRTVA MPVLNIVQTI PSIAMYGLMM
APLGLLAAHV PLAAALGIRG IGVAPAVLAL FLYSLLPIAS SVVVGLEQVP PHVTEAARAM
GMTRMQRLLR VDLVLALPVI LSGVRIVLVQ NIGLTAVAAL IGGGGFGTFI FQGIGQSAAD
LVLLGAIPTI ALALASAVVF EAATSLAKGR AG
|
|---|
| |