Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5141 |
Symbol | |
ID | 4452384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2189113 |
End bp | 2190036 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639697197 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_838767 |
Protein GI | 116693234 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.893931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCG CCCTGCCCGC CCGGATCCTG GGCCTCGCGT TCGCCGCCGC CATCGTGGCG CCCGGCGCAC ACGCCGACAC GCCCGTCGTG GTGTCGTCGA AGATCGACAC CGAAGGCAAC CTGCTCGGCA ACCTCATTTC ACAGGTGCTG AAGGCCCACG GCATTCCCGT CACCGAAAAG ATCGCGCTCG GCACGACGCC GATCGTGCGC AAGGCGCTCA CGAGCGGCGA GATCGACGTC TACCCCGAAT ACACGGGCAA CGCCGCATTC TTCTTCAACA AGGCCGACGA CCCGGTGTGG AAGAACGCGA GCCAGGGCTA CGACACCGCG AAGAAACTCG ACTACGCGGC GAACCATCTC GTGTGGCTCG CCCCGGCGCC CGCGAACAAC ACGTGGGGCG TCGCGCTGCT CGCGCCCGTC GCGCAGTCGC AGCACCTGAA GACCTTCTCC GATTTCGGCA AGTGGGTGGC CGGCGGCGGC AAGGTGAAGC TCGCGGCCTC GGCCGAATTC GTGAACAGCG CGTCCGCGCT GCCGTCGTTC GAGAAAGCGT ACGGCTTCAA GCTGAAGCCC GAGCAGCTCG TCGTGCTGTC CGGCGGCGAC ACGGCCGCGA CGATCAAGGC CGCCGCGAAC CAGACCGACG GCGTGAACGC CGCGATGGTC TACGGCACCG ACGGCGGCAT CGCATCGAGC GGCCTCGCGG TGCTCGACGA CGACAAGCAC GTGCAGCCCG TCTACGCGCC GGCGCCGGTG ATTCGCGAAG CCGCGCTGAA AGCGCATCCG CAGATCGCCG ACTTGCTCAA GCCCGTGTTC GCGAGCCTCG ACCTTAAGAC GCTGCAATCG CTGAACGCCC GCATCCAGCT CAACGGCGAG CCGGCGGCCG GCGTCGCGAA AAGCTACCTG AAAGCGAAGG GTTTCGTGAA ATGA
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Protein sequence | MKLALPARIL GLAFAAAIVA PGAHADTPVV VSSKIDTEGN LLGNLISQVL KAHGIPVTEK IALGTTPIVR KALTSGEIDV YPEYTGNAAF FFNKADDPVW KNASQGYDTA KKLDYAANHL VWLAPAPANN TWGVALLAPV AQSQHLKTFS DFGKWVAGGG KVKLAASAEF VNSASALPSF EKAYGFKLKP EQLVVLSGGD TAATIKAAAN QTDGVNAAMV YGTDGGIASS GLAVLDDDKH VQPVYAPAPV IREAALKAHP QIADLLKPVF ASLDLKTLQS LNARIQLNGE PAAGVAKSYL KAKGFVK
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