| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5136 |
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| Symbol | |
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| ID | 4452379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2182858 |
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| End bp | 2184126 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639697192 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_838762 |
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| Protein GI | 116693229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.433144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAA ACCGCTTGAA ACTCCCGTTC GAATGGCAGA TCGGGCTGCG CTACGCGCGC
GGCGGCCGGC GCTCGGCCGG CGACGGCTTC GTGTCGTTCA TCGCCGGCGC CGCGATGGCC
GGCATCGCGC TCGGCGTGGC CGCGCTGATC GTCGTGCTGT CGGTGATGAA CGGCTTTCGC
ACCGAGGTGC GCGACCGGAT GCTGTCGGTG CTCGCGCACG TGGAAATCTT CTCGCCGTCC
GGCGCGATGC CCGACTGGCG GCTGACCGCG CACGAATCGT TACAGAATGC GGCGGTGCGT
GCCGTCGCGC CCTATGTCGA CGCACAGGCG CTGCTGACGA ACGCGGGCAA TGTGACGGGC
GTCGCGTTGC GCGGCATCGA TCCCGTGCTC GAGCCGCGCG TGTCCGAGAT CGCGCGCAAG
CTGAAGACCG GACGCCTCGA CGCGCTCGTG CCGGGCGAGA TGGGCATCGT GCTCGGCGCC
GCGCTCGCCG ATACGCTGCA CGTGAAGATC GGCGACCGCA TCACGTTCTT CGCGCCCGGC
AACACCGCGC GCTTGGGCGA CGCGCTGCCG CGGTTCCGCC AGTTCAACGT GGTCGGTACG
TTCGAGTCGG GCCACTACCA GTACGACAGC GCGCTCGCGT ACATCCATAT CCGCGACGCA
CAGCAACTGT CCAACGTGAA CGCGCCGACC GGCATCCGGC TGCGCATCGA CGATCTGCAG
CGCGCGCCGG AAATCGCGCT GGCGCTGTCG CGCACGCTGT CGGGCAATCT GTACCTGCGC
GACTGGACGC GGCAGAACCG CACGTGGTTC GAAGCCGAGC GGCTGCAGAA ACGGATGCTG
TCGCTGATCC TGATGCTGAT CGTCGCGGTC GCCGCGTTCA ACCTCGTGTC GTCGCTCGTG
ATGACGGTCA CGCAGAAGCA GGGCGACATC GCGATCCTGC GCACGCTCGG CGCGCCGCCC
CGCTCGATCA TGAAGATCTT CGCGATCCAG GGGATGACGA TCGGCCTCGC CGGCACGCTG
GCGGGCGTTG CGCTCGGCTG CGCGATCGCG GTGAGCATCC CGGTGGTGCT GCCGGCGGTC
GAGCAGTTGC TCGGCATCCG CTTCCTGACG CCGTCCGTGT ATTTCCTCAG CGCACTGCCG
TCGAAGCTGT CGGCGCTCGA CGTGATCGAG ATCGCGTCGG CCGCGTTCCT GATGTCGTGC
GTCGCGACGC TGTACCCGAG CTGGCGCGCC GCGCGGGTGC GCCCGGCCGA GGCGCTGCGC
GACGAGTAG
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| Protein sequence | MKGNRLKLPF EWQIGLRYAR GGRRSAGDGF VSFIAGAAMA GIALGVAALI VVLSVMNGFR
TEVRDRMLSV LAHVEIFSPS GAMPDWRLTA HESLQNAAVR AVAPYVDAQA LLTNAGNVTG
VALRGIDPVL EPRVSEIARK LKTGRLDALV PGEMGIVLGA ALADTLHVKI GDRITFFAPG
NTARLGDALP RFRQFNVVGT FESGHYQYDS ALAYIHIRDA QQLSNVNAPT GIRLRIDDLQ
RAPEIALALS RTLSGNLYLR DWTRQNRTWF EAERLQKRML SLILMLIVAV AAFNLVSSLV
MTVTQKQGDI AILRTLGAPP RSIMKIFAIQ GMTIGLAGTL AGVALGCAIA VSIPVVLPAV
EQLLGIRFLT PSVYFLSALP SKLSALDVIE IASAAFLMSC VATLYPSWRA ARVRPAEALR
DE
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