| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5133 |
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| Symbol | |
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| ID | 4452376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2172925 |
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| End bp | 2175354 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639697189 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_838759 |
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| Protein GI | 116693226 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.391992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGACG CATCCCTGCT CCGGCGCGCG CTGCACTCCG CCGGCCGCTG GCTGCATCGC
TGGCAGAACT GGCTTGGGGG CGCGTTGCTC GTGTTCGGCG CGCTGGCCGC GTGCCGGCTG
TGGCCGCATC CGCCGCTGCG CGACTGGAAA CCGTCGTCCG TCGCGGTGAC CGACGCGCAG
GGCCGGCTGC TGCGCCTGAC GCTCGCGAAG GACGACCGCT ACCGGCTGTG GGTGCCGCTC
GACCGGATGT CGCCGCAGCT CGTCGAAGCC GTGATGCTGC ACGAGGACCG GTGGTTCCGG
TGGCATCCGG GTTTCAATCC GTACGGGCTC TTGCGCGGCG CATGGATCAC CTATGTGCGC
GGCGGCAATC CGCAGGGCGG CTCGACGCTG ACGATGCAGC TCGCGCGCTC GCTGTGGAAG
CTGAACACGC GCACGCCGGC CGGCAAGCTC GAGCAGGTCG CGCGTGCGGT GCAACTCGAA
CTGTTCTACT CGAAGCGGCA GATTCTCGAA GCGTATCTGA ACGACGCACC GTACGGCCGC
AACGTCGAAG GCGCGGGCAC CGCGAGCGTC GTCTATTTCG ACCGGATGCC CGACGCGCTG
ACGCTGCCCG AAGCGCTCGC GCTCGCGGTG ATTCCGCAGG ACCCGGCGCG GCGCGTGCGC
GGCGGGCAGG ACGCGATCAA CCGCGCGCTG GCCGCGTCGC GCAACCGGCT GTATGCGCGC
TGGCTGACGA AGCATCCGCG CGATGCGTCG CTCGCGCCGT TGTTCGCGTT GCCGCTCGCG
ATGCGGCCGC TGTCCGCGTT GCCGTTCGAT GCGCCGCATG CGGTCGACCA GGCGCTCGCC
GCGCGCAGCG CGTGGCGAAC GACGTCGGGC GCCACGGCGG CCGATGGCGA TCGCGATGAC
GGCAGCGATG GCGGCGCGCG GCTCGTGACG ACGCTCGATC TCGACCTGCA ACGCACGCTC
GAACGGCAGA TTTCACGCTA CGTCGCGCGC AACGATACGC GGGGTGTGCG CAACGCAGCG
GCCATCCTCG TCGATACGCG CGACATGGGC GTGAAGGCGC TGGTCGGCTC CGCGAACTTC
TTCGACCGGA CGATCGACGG GCAGGTGAAT GGCACGCTCG CGCGGCGCTC GCCGGGCTCG
ACGCTCAAGC CGTTCATCTA TGCGCTCGGC TTCGACCAGG GCGTGCTGCA TCCGCAGACC
GTGCTGCGCG ACGTGCCGAC TTCGTTCGGC CCTTACGCGC CGGAGAATTT CGACGGTCAT
TTCCTCGGGC CGATCACGGC GACCGACGCG CTGAACCGCA GCCGCAACGT GCCGGCCGTG
TGGGTCGCAT CGCAGCTCAA GTCGCCGGAC CTGTACCGGT TCCTGCAGGA CGCCGGCGTG
CGCCGGCTCG CGAGCGCGCA GCACTACGGG CTCGCGCTCG TGCTCGGCGG CGGCGAAGTG
ACGATGCAGG ATCTCGCGGC GCTCTACGCG ATGCTCGCGA ATCGCGGCGA GTTCCGGCCG
CTGCGGCTGC GCGCGGACGA ACCGGCGCTG CCCGGCCGAC GCCTGCTGAG CACCGAAGCG
AGCTACATGA CGATGGACAT GCTGCGCCAG CACCTGCGCC CCGACGAGAC GAGCGGCGCG
CAGCCGTCGA GCGTGCCCGT GTACTGGAAG ACCGGCACGT CATGGTCGTT CCGCGATGCG
TGGACGGCCG GCGTGTTCGG CCCGTACGTG CTGGTCGTGT GGGTCGGCAA CTTCGACAAT
TCGACCAATA CCGCGTTCGT CGGTGTCGAT GCGGCCGCGC CGCTGTTCTT TCAGGGCGTC
GATGCGATGA ATGCGGAACG TACGCTCGTC GAGCCGCCGC GCGCGGTGCC GCCGAACCTG
AAGCGCGTGC GGGTCTGTCT CGCGAGCGGC GACCTGCCGA ACGAGTGGTG TCCGCAGCAG
GGCTGGACGT GGTTCATTCC AGGCACGTCG CCGATCCGCG TGAGCACCGT GCACCGGCCC
GTCGTGATCG ACGACGCGAC GGGGCAGGCC GCGTGCCCGC CGTACGACGG CAAGCGCACG
CATACGGAAG TCTTCGAGTT CTGGCCGTCG GATTTGCAGC AGGTGTTCGC GCAGGCCGGC
ATTCCGCGCC GGCGGCCGCC GCAGAATGCG GCGTGTCGCG ATGCCGGGCA GGTCGAAGGC
GACCCGCCGC GCATCACGTC GCCGCTGCGC GGCAGTACGT ATGCGATGCG CGTGAAAAGC
ACCGACGAAA CGCGTATCGC GTTCAACGCG ACCGCCGATG CGAGCGCGCA TGCGCTGTAC
TGGTTCGTCA ACGACGCGTA CGTCGGCCGC AGCGCGCCGG GCGATGCGCT GTTCTGGCAG
CCGCGCACGG CCGGCAGCTA TACGGTGCGG GTGGTCGACG ATCACGGCCG CAGCGACCAG
CGGCCGCTGG GCGTGGGGCT GGAACAGTAA
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| Protein sequence | MADASLLRRA LHSAGRWLHR WQNWLGGALL VFGALAACRL WPHPPLRDWK PSSVAVTDAQ
GRLLRLTLAK DDRYRLWVPL DRMSPQLVEA VMLHEDRWFR WHPGFNPYGL LRGAWITYVR
GGNPQGGSTL TMQLARSLWK LNTRTPAGKL EQVARAVQLE LFYSKRQILE AYLNDAPYGR
NVEGAGTASV VYFDRMPDAL TLPEALALAV IPQDPARRVR GGQDAINRAL AASRNRLYAR
WLTKHPRDAS LAPLFALPLA MRPLSALPFD APHAVDQALA ARSAWRTTSG ATAADGDRDD
GSDGGARLVT TLDLDLQRTL ERQISRYVAR NDTRGVRNAA AILVDTRDMG VKALVGSANF
FDRTIDGQVN GTLARRSPGS TLKPFIYALG FDQGVLHPQT VLRDVPTSFG PYAPENFDGH
FLGPITATDA LNRSRNVPAV WVASQLKSPD LYRFLQDAGV RRLASAQHYG LALVLGGGEV
TMQDLAALYA MLANRGEFRP LRLRADEPAL PGRRLLSTEA SYMTMDMLRQ HLRPDETSGA
QPSSVPVYWK TGTSWSFRDA WTAGVFGPYV LVVWVGNFDN STNTAFVGVD AAAPLFFQGV
DAMNAERTLV EPPRAVPPNL KRVRVCLASG DLPNEWCPQQ GWTWFIPGTS PIRVSTVHRP
VVIDDATGQA ACPPYDGKRT HTEVFEFWPS DLQQVFAQAG IPRRRPPQNA ACRDAGQVEG
DPPRITSPLR GSTYAMRVKS TDETRIAFNA TADASAHALY WFVNDAYVGR SAPGDALFWQ
PRTAGSYTVR VVDDHGRSDQ RPLGVGLEQ
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