Gene Bcen2424_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5127 
Symbol 
ID4452370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2164194 
End bp2165441 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content68% 
IMG OID639697183 
Productextracellular solute-binding protein 
Protein accessionYP_838753 
Protein GI116693220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.600349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGA TGCGGGCGCG ACGCCCCACC CGCTTCAACC GGACACCGAC CATGAATACT 
CGCCTCACTT CCGTTACCGT CGCCAGTCTG CTCGCCGTGG GCGTGGTGCT GACACCGGCA
ACCGCATCGG CCGGCGTGCG CGTCTGCACG CTGCCCGGCA GCCCCACCAC GGCGCTCGAT
CGCTCCGTCG CGCGCGAAGT GTTCCGCACC GCGGGCATCG CCGCGACCTT CAACACACGC
GGCGTCGACG ACAACGGCGA CGACGACGGC ATCTCCGCCA GCGAGCTGAC GAAATCGCTC
GAACGCGACT GCGACGTGAT CGCCGGCTTC CCGCGCTCCG CGATCGCCGA TGCGTCGGGA
TCGAAGATGA CGTTCTCGCA AGGCTATCTG CGCTCCGGCT ACGTCAGCGT GTCGCTGCGC
GATGCGCCCG CGCCGTCCGG CGCGAAGGAA ACGATCGCGG CCACCTACGG CAGCCCGTCG
CAACTGATCG CCGCGCAGCA GACGAACGCC CGCTTCGACC TCGAGAACAC GAGCGAGAAA
ACGATCGGTG CGCTCGCCGC GGGCCGTGCG CAGCGCGCGA TCGTCTGGTA TCCGAGCGTC
GTCGCATACG AGCGTGCGCA CCCGAAACAA CGGTTCCAGG TGGCGGCGAC GTCGTCGCCG
TACTCCGACT GGCAACTGTC GTTCGCGTTC GGGCCAGGCA AGGACGCGCT GCAACAGCGC
ATCGACGCCA CGCTGTCGCA ACTGAGCGGC AACGGCCGCC TCGCGTCGCT CACGCGCGGC
TGGACGCTGC CCGACGGCAT CGCGCAAGCC GCCGCCTCGC GCGTGCCCGG CCGGTTTCTC
GACGGCGCGA TCGCGTCCGC GCAGCGGCCC GGCTTCGTCA AGGTGTCGAC GAGCGAAGGC
GGCGGCGTCC CGTCGTTCGA CCAGGCTCAG GTGCAGCATG GCAAGAAGCT CTACGGCGAT
GCGTGCGCGA AATGCCACGG CGACCAGCTC GAGGGCAATA CCGCGCCCGC GCTGAGCGGG
GAATCGTTCG CGCCCGAAGG CAAGTCGCAC ATCACGGTCG GCGGCATCTT CCTGTACATG
TCGAGCAACA TGCCGGCCGA TCGCCCCGGC AAGATGTCCG CGCAGGAATA CGAGGATCTG
ATGGCGTTCC TGCTTTATTC GAACGGCTAC GACGCGTCGA AGAACAAGCT GACCGCCGAG
ATCGCGAATG CGTCGAAGGC GCCGCTGATC GCCGGGCCGC GCAAGTAA
 
Protein sequence
MRPMRARRPT RFNRTPTMNT RLTSVTVASL LAVGVVLTPA TASAGVRVCT LPGSPTTALD 
RSVAREVFRT AGIAATFNTR GVDDNGDDDG ISASELTKSL ERDCDVIAGF PRSAIADASG
SKMTFSQGYL RSGYVSVSLR DAPAPSGAKE TIAATYGSPS QLIAAQQTNA RFDLENTSEK
TIGALAAGRA QRAIVWYPSV VAYERAHPKQ RFQVAATSSP YSDWQLSFAF GPGKDALQQR
IDATLSQLSG NGRLASLTRG WTLPDGIAQA AASRVPGRFL DGAIASAQRP GFVKVSTSEG
GGVPSFDQAQ VQHGKKLYGD ACAKCHGDQL EGNTAPALSG ESFAPEGKSH ITVGGIFLYM
SSNMPADRPG KMSAQEYEDL MAFLLYSNGY DASKNKLTAE IANASKAPLI AGPRK